Novosphingobium sp. ES2-1: IM701_05480
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Entry
IM701_05480 CDS
T10689
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
novo Novosphingobium sp. ES2-1
Pathway
novo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
novo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
IM701_05480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
novo03400
]
IM701_05480
Enzymes [BR:
novo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
IM701_05480
DNA repair and recombination proteins [BR:
novo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
IM701_05480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_C
DEAD
PriA_3primeBD
ResIII
Zn_ribbon_PriA
Helicase_C
AAA_30
AAA_22
MerR_1
AAA_19
HTH_5
Zn_ribbon_6
zf_Rg
PIF1
DAP3
Motif
Other DBs
NCBI-ProteinID:
QOV94893
LinkDB
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Position
complement(1131854..1134019)
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AA seq
721 aa
AA seq
DB search
MNRVRCLVFNSALGPLDYRVPAGMDVEPGSVVIAPLGPRQIIGVVWEAERLPGTEVPDAK
LRPLLQVLPVPPLPAPLRRLIEWTADYYVAPLAAVARMALSSTAALQGGGTVTEYRLTGR
EPERMTPQRLIALDLLQDQQATIRELSEIAGVSDGVLRGMVNAGLLEPVVVDSDRPYPPA
DAGFASPDLSDEQSEVAARFVEAVNKHDFHPFLLDGVTGSGKTETYFEAVAAAIEHGRQV
LVLLPEIALTETFLKRFEARFGVPPVTWHSSLKSSERRRAWRAVAAGTAQVVVGARSALF
LPFARLGLIVVDEAHEISFKQDDGVRYNARDVAVMRAHFEKVPVILASATPALESLQMAE
AGRYERAVLPARFGGATMPDIQIVDLREQQPERGHWIAPPLVEALKDRLAKGEQSLLFLN
RRGYAPLTLCRTCGYRFQCPNCSAWLVEHRLSRRLACHHCGHEIPPPDACPECSEPDCLV
ACGPGVERIADEVAAILPEARVALVTSDTLTSPAKAAEFVEMASNKAIDVIVGTQLVTKG
YHFPELTLVGVIDADMGLEGGDLRAAERTYQQVAQVAGRAGRGEKPGEVLIQTRHPEAPV
IEALASGDRDAFYAAEAEARRDAGAPPFGRWAAIIVSSEDEAEARDAARGIGGSAPRLDD
VLILGPAPAPLSLLRGRYRYRLLINARRSTELQRVIRDWLDPLRFPPGVRVAVDIDPYSF
V
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgcgtccgatgccttgtcttcaactccgcgctcggcccgctcgactatcgcgtg
cccgccgggatggacgtggaacctggcagcgtcgtgatcgcaccgctggggccgcggcag
atcatcggcgtggtctgggaagcggaacggctgccgggaactgaagttccggatgccaaa
ctccgcccattgcttcaggttctccctgtccctcccctgcccgcaccattgcggcgcctg
atcgagtggactgccgactattacgtcgcgccgcttgcggcagtggcgcgcatggcgctg
tcaagcacggccgcactgcaaggcggcggcaccgtcaccgaatatcgcctgaccggccgc
gagccggaacgaatgacgccccagcgtctcatcgctctggacctgttgcaggaccagcag
gcaacgatccgcgaactgtcggaaatcgccggggtctccgacggcgtgctgcgcggcatg
gtcaatgccgggctgcttgaaccggtggtggtcgattcggaccggccctatccacccgcg
gatgccggtttcgcctctcccgacctgtcggatgagcaatcggaagtcgccgcccgcttt
gtcgaggcggtcaataagcatgacttccacccgtttctgctcgacggcgtgaccggctct
ggcaagacggaaacctatttcgaagctgtagcagccgcgattgagcatgggcggcaagtc
ctcgtgctccttccggaaatcgcgctcacagaaaccttcctcaagcgcttcgaagcgcgc
tttggggtaccgccggtcacgtggcattcctcgctgaaatcgtccgaacggcggcgcgcg
tggcgggctgtggcagcaggaacggcgcaagtggtggtcggtgcacgcagcgcactgttc
ctgcccttcgcccgcctcggcctcatcgtcgtcgacgaagcgcacgagatctcgttcaag
caggacgacggggtgcgctacaacgcccgcgacgtcgcagtcatgcgcgctcatttcgag
aaagtgccagtcatccttgccagcgccacgccggcgctggaaagtctgcagatggccgaa
gccgggcgttacgagcgggcggtcctgcccgcacgctttggcggggcgacgatgccagac
atccagattgtcgacctgcgcgagcaacagcccgagcgcggacactggatcgcgccgcca
ttggtcgaggcactgaaggatcggctcgccaagggcgagcagtcactgcttttcctgaac
cggcgcggctatgctccgcttaccctgtgccggacctgcggctatcggttccagtgcccc
aactgctcggcctggctggtcgagcaccgcctctcgcgccgcctcgcctgtcaccattgt
ggacacgagatcccgccgcccgatgcctgccccgaatgcagcgagcccgattgccttgtc
gcctgcggccccggggttgaacgcattgcagacgaggttgcggcgatcctgcccgaagcc
cgcgtcgcgctggtcacttccgacacgctgaccagccccgcgaaggctgcagagttcgtc
gagatggcaagcaacaaggcgatcgacgtgatcgtcggcacccagcttgtcaccaagggc
taccactttccggaactcacgctggtcggcgtgatcgatgccgacatgggcctcgagggc
ggcgatcttcgcgcagccgaacgcacctatcagcaagtggcgcaagtcgcaggccgcgcc
ggccgtggtgaaaagcccggcgaggtgctgatccagacccggcaccccgaagcgccggtt
atcgaggccctggccagcggcgaccgtgacgccttctacgccgccgaagccgaagcccgg
cgcgatgccggagcgccacccttcggacgttgggccgcgatcatcgtttcaagcgaggac
gaagccgaagcgcgcgacgctgctcgcgggattggaggttcggcgccgcgactggacgac
gtgctgattctcgggcctgccccggcgccgctgtcgctcctgcgcggccgctatcgctac
cgcctgctgatcaacgcacgccgctccaccgaactgcagcgcgtaatccgcgactggctc
gatcccctgcgcttcccgccgggcgtccgtgtcgccgtggatatcgatccctacagcttt
gtctga
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