Novosphingobium sp. ES2-1: IM701_06305
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Entry
IM701_06305 CDS
T10689
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
novo Novosphingobium sp. ES2-1
Pathway
novo00220
Arginine biosynthesis
novo00240
Pyrimidine metabolism
novo00250
Alanine, aspartate and glutamate metabolism
novo01100
Metabolic pathways
novo01110
Biosynthesis of secondary metabolites
novo01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
novo00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
IM701_06305 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
IM701_06305 (carB)
00220 Arginine biosynthesis
IM701_06305 (carB)
Enzymes [BR:
novo01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
IM701_06305 (carB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
MGS
Dala_Dala_lig_C
ATP-grasp
ATPgrasp_Ter
ATP-grasp_3
ATP-grasp_4
RimK
ATP-grasp_5
ATP-grasp_2
CoA_binding_2
MucBP_2
Motif
Other DBs
NCBI-ProteinID:
QOV95043
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All DBs
Position
1325612..1328935
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AA seq
1107 aa
AA seq
DB search
MPKRTDISSILIIGAGPIIIGQACEFDYSGTQAVKALKEEGYRIILVNSNPATIMTDPDM
AHATYVEPITPEVVAKIIEKERPDALLPTMGGQTALNTALALFNDGTLEKYGVQMIGANA
DAIDKAEDRQRFREAMDKIGLESARSGVAHTIDEALEILERTGLPSIIRPSFTMGGTGGG
IAYNKEEFVKIVKGGLEASPTTEVLIEESLLGWKEYEMEVVRDKKDNCIIICSIENVDPM
GVHTGDSITVAPALTLTDKEYQIMRNASIAVLREIGVETGGSNVQFAVNPKDGRLIVIEM
NPRVSRSSALASKATGFPIAKVAAKLAVGYTLDEIMNDITGATPAAFEPTIDYVVTKIPR
FAFEKFKGAEPLLGTAMKSVGEVMAIGRNIKESMQKALRGLETGLDGFNRVVGLEGASRD
EITAALARATPDRLLVIAQAFREGLSVDEVHAVTKYEPWFLRHIHEIVEAENVIQRDGLP
NDAAGLRRLKAMGFSDKRLATLAVRGIGVAGGMAETQAKRSGLLHDALRAMAGATSEAEV
RSLRHKLGVRPVFKRIDSCAAEFEAVTPYMYSTYEGALFGEPENEAAPTDAKKIVILGGG
PNRIGQGIEFDYCCCHACFALGDAGFETIMVNCNPETVSTDYDTSDRLYFEPLTAEDVLE
ILAVEQSKGELVGVIVQFGGQTPLKLAQALQDAGIPILGTSPDSIDLAEDRERFAALVAK
LGLKQPANGIARSRDEAVAVASRIGYPVLIRPSYVLGGRAMEIVDSQAQLDDYIATAVQV
SGDSPVLIDQYLRDAIECDVDALADGTDVTVAGVMQHIEEAGIHSGDSACTLPPYSLSAE
IIAEMERQAVLLARGLNVRGLMNIQFAIKDGEVYLIEVNPRASRTVPFVAKAVGTPIAKI
AARVMAGEKLADLPAIKREIDYMAVKEAVFPFARFPGIDPVLSPEMKSTGEVMGVDKTFA
VAFAKSQLGAGTKLPQSGTIFVSVKDSDKAVILPAVRKAISLGFKIVATGGTARYLTDAG
LIIERVNKVAEGRPHIVDRIIDGDIALIFNTTEGWQSHKDSQSIRASALNSRVPYFTTAA
ASVAAVEAIEALRSAELEVRSLQDYYA
NT seq
3324 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaacgcactgacatctcctccatcctgatcatcggcgccgggccgatcatcatc
ggccaggcttgcgagttcgattattcgggcacgcaggcggtgaaggcgctcaaggaagag
ggctatcgcatcatcctggtcaactcgaaccccgcgacgatcatgaccgatccggacatg
gcgcacgcgacctacgtcgagccgatcacgcccgaagtcgtcgccaagatcatcgagaaa
gagcgccccgatgcgctgctgccgacgatgggcgggcagaccgcgctcaacaccgcgctg
gcgctgttcaacgatggcacgctggaaaagtacggcgtccagatgatcggcgccaatgcc
gatgccatcgacaaggccgaagaccgccagcgcttccgcgaggcgatggacaagatcggc
ctcgaatccgcgcgctcgggcgtggcgcacaccatcgacgaggcgctcgaaatcctcgag
cgcaccggcctgccttcgatcatccgccccagcttcaccatgggcggcaccggcggcggc
attgcctacaacaaggaagagttcgtcaagatcgtgaagggcgggcttgaagcatcgccc
actaccgaagtcctgatcgaggaatcgctcctcggctggaaggaatacgagatggaggtt
gtccgcgataaaaaggacaactgcatcatcatctgctcgatcgaaaacgtcgatccgatg
ggcgtccacaccggcgattccatcaccgtcgccccggcgctgacgctgaccgacaaggaa
taccagatcatgcgcaacgcatcgatcgcggtgctccgggaaatcggcgtggagaccggc
ggttcgaacgtacagttcgcagtgaatccgaaggacggccgcctgatcgtcatcgagatg
aacccgcgcgtttcgcgctcctcggcactggcctcgaaggccaccggcttcccgatcgcc
aaggtcgcggccaagcttgccgtgggctacacgctcgacgagatcatgaacgacatcacc
ggggccaccccggcggcgttcgagccgaccatcgactacgtcgtcaccaagatcccgcgc
ttcgccttcgagaagttcaagggcgcggagccgctgctcggcaccgcaatgaagtcggtc
ggcgaagtcatggcgattggccgcaacatcaaggaatcgatgcagaaggccctgcgcggg
ctggaaaccggccttgatggcttcaaccgcgtcgtcggcctcgaaggcgccagccgcgat
gagatcaccgccgcgctcgcccgcgccacgcccgatcgcctgctggtgatcgcgcaggct
ttccgcgagggcctgtcggtggatgaagtccacgccgtcaccaagtacgagccgtggttc
ctgcgtcatatccacgagatcgtcgaagccgagaacgtcatccagcgcgatggcttgccc
aacgacgcggcgggcctgcgccgcctgaaggcgatgggcttctccgacaagcgcctcgcc
acgctggccgtgcgcggcattggcgttgccggtggcatggcagagacccaggccaagcgc
tcgggcctgctgcatgacgcgctgcgcgccatggccggtgccaccagcgaagccgaagtg
cggtcgttgcgccacaagctcggcgtgcgcccggtgttcaagcgcatcgacagctgcgcc
gccgagtttgaggcggtcacgccctacatgtattcgacctacgaaggcgcgctgttcggc
gagccggagaacgaggctgctccgactgacgccaagaagatcgtcatcctcggcggtggt
ccgaaccgcatcggtcagggcatcgagttcgactactgctgctgccacgcctgcttcgcg
ctgggtgacgccgggttcgagaccatcatggtcaactgcaacccggagaccgtgtcgacc
gactacgacacctcggatcgcctctacttcgagccgttgaccgccgaagacgtgctggaa
atcctcgcggtcgaacagtcgaagggcgaactggtcggcgtgatcgttcagtttggcggg
cagaccccgctgaagctcgcgcaggcgctccaggatgcgggcatcccgatcctcggcaca
tcgccggactcaatcgaccttgccgaagaccgagagcgcttcgcagcattggtcgccaag
ctcggcctcaagcagcccgccaacggcattgcccgcagtcgtgatgaggccgtcgcggtg
gcgagccgcattggctatcccgtgctgatccgtccgagctacgtgctcggcggccgcgcg
atggagattgtcgacagccaggcgcagctggatgactacatcgccactgccgtgcaggtc
tcgggcgacagcccggtgctgatcgaccagtacctgcgcgacgcgattgagtgcgacgtc
gatgctctggccgatggcacggatgtaaccgtcgccggtgtaatgcagcatatcgaggaa
gcgggcattcactcgggcgacagcgcctgcaccctgccgccctacagcctgtcagccgaa
atcatcgcagagatggagcgccaggcggttttgctggcacgcggcctcaacgtgcgcggt
ctgatgaacatccagttcgcgatcaaggacggcgaggtctatctgatcgaggtgaacccg
cgtgccagccgcacggtgccgttcgtcgccaaggccgtgggtacgcccattgccaagatc
gcggcgcgcgtcatggcgggcgagaaactggccgatctccccgcgatcaagcgcgagatc
gactacatggcagtcaaggaagccgtgttcccgttcgcccgtttccccggcatcgacccc
gtgctctcgccggaaatgaagtcaaccggcgaagtcatgggcgtcgacaagaccttcgcg
gtcgctttcgccaagtcgcagcttggtgcaggcaccaagctgccgcagagcggaacgatc
ttcgtttcggtcaaggatagcgacaaggcggtgatcctgcccgccgtgcgcaaggcgatc
agcctgggcttcaagatcgtggccaccggtggtacggctcgctatctgaccgatgcgggc
ttgatcatcgaacgagtgaacaaggtggccgaaggccgtccgcacatcgtcgaccggatc
atcgatggcgacatcgcgctgatcttcaacacgactgaaggctggcagagccacaaggac
tcgcaatcgatccgcgcttcggcgttgaactcgcgcgttccctacttcacgacggctgct
gcttccgtcgctgcggtcgaggcaatcgaggcacttcgctctgccgaacttgaagtgcgt
tcgttgcaggactattatgcttga
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