Novosphingobium sp. ES2-1: IM701_07990
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Entry
IM701_07990 CDS
T10689
Symbol
addA
Name
(GenBank) double-strand break repair helicase AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
novo Novosphingobium sp. ES2-1
Brite
KEGG Orthology (KO) [BR:
novo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
novo03400
]
IM701_07990 (addA)
Enzymes [BR:
novo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
IM701_07990 (addA)
DNA repair and recombination proteins [BR:
novo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
IM701_07990 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_30
DEAD
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
QOV92642
LinkDB
All DBs
Position
complement(1637579..1641100)
Genome browser
AA seq
1173 aa
AA seq
DB search
MAGSRRGKRPVSKVYPLRDNQAHAVHPQRTVWLSASAGTGKTQVLSARVLRLLLQEGVEP
EQILCLTFTKAGAAEMATRVNEVLASWVRLPEIELAAQLKAIGAPFGPETVARARSRFAA
VLDCPGGGLRIETIHAFCQWLLASFPVEAGLRPGSRAMEDRDRALLVRQVLAELLVSAEI
EGDEALIDGLASLSRRMSEDQVEAFLLRCAGALDLWTGPGAWQPPLRPRINRVIGLGEDD
GPESLAAMCADDRFDCESVRRCMEMNSAWGTKSGIETANTLGDWLAAGPEGRLNTFAALK
SQFLTAKDEAKSTTNIEKKQPGYADCAARVIACVEAVKARKAQLDLADLLETALTIGRRF
ALAWSDAKAREGFIDFDDQIRTAADLLTKRTSAEWIRFKLDRRFDHILVDEAQDTNASQW
EIVLEGLVSDFFTGEGQRGPAVRTLFVVGDYKQAIFGFQGTSPENFAQASLRVREQLDQV
AQILSDPDRKLLELGLGQSFRTSRPILEFVDRAIDHLGWDRLGLDRKPERHVGLDIPGTV
GLWKIVGDDAPDEEDDGGGGDQGGGDEGAESWLSRPDRKLADQIALQVKAWIDSGFPLGK
AQRHAGAGDVMVLVRKRKELAGLIVARLHARGVPVAGVDRLRLGAPLAVKDLVAALRFAA
QPLDDLNLAALLVSPLIGWSQEDLLEHGYRRQGVRLWDWLRQNEGPATFATMEQLRSLLA
RADFDPPQVLLHWLLVGPWDGRRRLVARLGREANDPIDELLNAAIAFSSANVPSLIGFLQ
WFDAGEGELKREAGKADGLVRVMTVHGSKGLQAPIVILADAADDPDLSPPRGLELVEDVL
GSVRKVPLPSLRKGEKAPAVLEAEAEAKLAEREEHWRLLYVAMTRAEEALFIAGAKGKRR
RKGAGDLPEDSWYAQLEPLFEGDWRSDPLWGAVKQIGGPASLKGQPAKRSGRSARIEVPE
VLRAAVGPEPRPPRPLAPSSLGEDEAPDPPAPPGPHAMLAARRGTLLHRLIERLPELPVE
RRQEAGLAWLARMASDFDNSDHVAMVADAIAVIDQPGWNDVFGPDSLAEVPLAAVVGGRV
VSGTVDRLVISDKGIRIVDFKTARRPPASLEEIPAAYIRQMAAYVAALEAIHPGLPVEAA
LLYTHTPQLFVIPDDLIAAQKLRLAGVQESLSG
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atggcagggtcgcgaagaggaaagcggccagtgagcaaggtctatcccctcagggacaat
caggcgcatgcggtccatccgcagcgcaccgtctggctatctgcgtccgcagggaccggc
aagacgcaggtcctttccgcgcgcgttctgcgcctgcttctgcaggagggtgtcgaaccc
gagcagatcctttgcctgactttcaccaaggcgggtgccgccgaaatggcgacgcgcgtc
aacgaggttctcgccagctgggtgcgtcttcccgagatcgagctcgccgcgcagttgaag
gcgattggcgcgccgttcggacccgaaaccgtggcccgcgcgcgcagccgctttgccgcc
gtgctcgattgccccggcggcggtctcaggatcgagaccattcacgccttctgccagtgg
ctgcttgcatcttttcccgtggaggcgggattgcgaccgggcagccgagccatggaggac
cgcgacagggcactgctggttcggcaagtgctggccgaattgctggtttcggccgaaatc
gagggcgacgaggcattgatcgacggtcttgcctcgctctcgcgccggatgagcgaggat
caggtggaagcctttctgctgcgttgcgccggtgcactggatctgtggacagggccgggc
gcatggcaaccgccactgcgcccgcggatcaaccgcgtgatcgggctgggcgaggatgac
gggccggagagccttgccgccatgtgcgccgatgatcggttcgattgcgagtccgtccgg
cgctgcatggagatgaacagcgcctggggcaccaagagtggtatcgaaaccgcgaacacc
cttggcgactggctcgccgcgggcccggaagggcgcctgaacacctttgccgcgctgaag
agccagtttctcacggccaaagatgaagccaagtcgaccacgaacatcgaaaagaagcag
cccggatatgccgactgtgccgcgcgggtcattgcctgcgtcgaggcagtaaaggcccgc
aaggcacagcttgatcttgccgacctgctcgagacagcgcttaccatcggtcgccgtttt
gccctggcctggagcgatgccaaggcgcgcgagggcttcatcgatttcgatgaccagatc
cgcaccgccgctgaccttctgaccaagcgcaccagcgccgaatggatccgcttcaagctc
gatcgccgcttcgaccacatccttgtcgatgaagcgcaggacacaaatgcctcgcagtgg
gagatcgtgctcgaagggctggtgtccgacttcttcaccggcgaaggccagcgtgggcct
gccgtgcgcacgctgttcgtggtgggcgattacaagcaggccatcttcggttttcagggg
acgagtcccgagaacttcgcgcaggcgagccttcgggtcagggagcaactcgatcaggtc
gcgcagatcctctccgacccggaccgcaagctgctcgaactcgggctgggccaatcgttt
cgcacctcaaggccgatcctcgaattcgtcgaccgtgccatcgatcatctggggtgggat
cggctgggccttgatcgcaagcccgagcgccatgtcggtctggatatccccggcacggtc
ggcctctggaagatcgtcggcgatgatgcgccggacgaggaggatgacggtggcgggggc
gaccagggagggggagacgagggcgccgaaagctggctctcgcgccctgatcgcaagctg
gcggaccagatcgcgctgcaggtgaaggcgtggatcgacagcggcttcccactgggcaag
gctcagcgccatgccggtgcgggcgacgtcatggtcctggtgcgcaagcgcaaggaactg
gcggggctgatcgtggcacgtctgcacgcgcgcggcgtgccagtggcgggcgtggaccgg
ctgcggcttggcgctccgcttgcggtgaaggacctggtggccgcgctgcgctttgccgcg
caaccgctggatgacctgaacctggctgcgttgctggtttctccgctgatcgggtggtcg
caggaagacctgctcgaacacggctatcgcaggcagggcgtgcggctgtgggactggctg
cgccagaacgaggggcctgcgactttcgcaacgatggagcaattgcgcagcctgcttgcc
cgggccgatttcgatccgccgcaagtgctgctgcattggttgctagtggggccttgggat
ggccgtcgcagactggtcgcacgccttgggcgtgaggccaacgatccgatcgacgaactg
ctcaacgcagcgatcgcgttttccagcgccaatgtgcccagcctgatcggcttcctgcag
tggttcgacgccggggagggtgagctcaagcgcgaggcaggcaaggctgatggcctggtg
cgggtgatgaccgtgcacggatcgaaggggctgcaggcgccgatcgtgatcctcgccgat
gctgcggatgatccggacctgtctccaccccgcggtcttgagcttgtcgaagacgttctg
gggtccgtgcgcaaggtccccctgccgtcgctacgaaagggggagaaggcacccgctgtt
ctcgaggcggaggcagaagccaagctcgccgagcgcgaggagcattggcgtctgctctat
gtggcgatgacgcgtgccgaggaagccctgttcattgcaggggcgaagggcaaaaggcgc
aggaagggggcaggtgaccttcccgaggacagctggtacgcacaactcgagccgctgttc
gagggcgattggcgcagcgatccgctttggggcgcggtcaagcagatcggcggtcctgcc
agcctgaaaggccagccggccaagcgatccggacgttctgcgcggattgaggtcccggag
gtgttgcgcgctgcagtcggccccgaacctcgcccgccgcgcccgcttgcaccttcatcg
ctgggagaggacgaggccccggatccgccagcgccgcccggtcctcatgccatgctggcg
gcaagacgcgggacgctgctgcatcgccttatcgagcgtcttccggaacttccggtcgag
cggcgacaggaggctggtctcgcctggcttgcccggatggcgagcgatttcgacaattcg
gaccacgtggccatggtggcggatgccatagcggtaatcgaccaaccgggctggaacgac
gtcttcggcccggattccctggctgaagtgccgctggcagcggtcgtcggaggccgcgtc
gtgagcggcacggtggaccgccttgtcatctcggacaagggcatacggatcgtggatttc
aagacagcgcgccgccctccggcctcgctcgaggagattcctgcggcctacatccgccag
atggccgcctatgttgccgcgcttgaagcaatacaccccggcctgccggttgaagctgcg
ctgctctatacccacacgccgcaattgttcgttattcccgatgacctgatcgcagcgcaa
aagctgcgccttgccggggttcaggaatccttgtccggctga
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