Novosphingobium sp. ES2-1: IM701_08780
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Entry
IM701_08780 CDS
T10689
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
novo Novosphingobium sp. ES2-1
Brite
KEGG Orthology (KO) [BR:
novo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
novo03032
]
IM701_08780 (topA)
03400 DNA repair and recombination proteins [BR:
novo03400
]
IM701_08780 (topA)
Enzymes [BR:
novo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
IM701_08780 (topA)
DNA replication proteins [BR:
novo03032
]
Prokaryotic type
DNA Topoisomerases
IM701_08780 (topA)
DNA repair and recombination proteins [BR:
novo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
IM701_08780 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
HC2
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
QOV92776
UniProt:
A0A7M2X4R6
LinkDB
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Position
complement(1806459..1809059)
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AA seq
866 aa
AA seq
DB search
MQLVIVESPAKAKTIEKYLGPGFKVLASYGHIRDLPVKDGSVRPDEDFAMDWELYGDKQS
RVKAITDAAKDADRLILATDPDREGEAISWHVRELLKKRKALPKEVERVTFNAITKQTVT
DAMKRPRELDQDLIDAYLARRALDYLFGFTLSPVLWRKLPGAKSAGRVQSVALRLIVERE
REIEVFKAQEYWSVIARLEQGGTEFAARLVKFDGQKLDKLTLGDEGAAMKAKAVVEAGTF
RVEDVETKPTRRNPYPPFTTSTLQQEAARKLGFSASHTMRVAQTLYEAGAITYMRTDGVQ
MDPSAISAARKAISDRYDGHYLPEKPRHYETKAKNAQEAHEAIRPTDFSKDRYGSGDEAR
LYDLIYKRAMASQMASANIERTSVTLRDGTGKHELRATGQVVKFPGFLAVYEEGRDQKAD
GDDEDGSLLPSLNKGDTPAKRGVDATQHFTQPPPRYSEASLVKRLEELGIGRPSTYAATL
QVLKDRNYVRTEKNRFFAEESGRLLTSFLERFFTRYVAYEFTAGMEEELDDVSGGRAEWK
KVLAEFWRDFKPKSDEVMEKKPSEVTAELDEFLSDYLFPPREDGSDPRLCPKCEAGRLSL
RGGRYGAFVACSNYPECKYTRKFAQPGGSDGDGGEDGVLGKDPETGLEVVRKAGRFGPYI
QLGEGKEAKRASIPKDIGELDLEWALKLLSLPREVGKHPESGNPITASIGRYGPYLAHDG
KYARLKSTSEVFETGMNAAVMHLAAAAAGAGARGGRTAAEPLKVFGAHPTSGGEIKLMAG
RYGPYVTDGTTNATLPKDKQPEALTLEEAITLIDERAAKGPAKGKKGAKKAPAKKAAPKK
DAPKKEAAKKPAAKKAPAKKVAKSAE
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atgcagcttgtcattgttgaatccccggccaaggccaagaccatcgagaagtacctcggc
cccggcttcaaggttctcgcctcctacggtcatatccgcgatcttccggtaaaggatggc
tctgtccgtcccgacgaggacttcgcgatggattgggaactctacggggacaagcagtcc
cgtgtgaaagccatcaccgatgcggccaaggacgccgatcgccttatcctggcgaccgac
cctgatcgtgaaggcgaggcaatttcctggcatgtcagggagttgctgaagaaacgtaag
gcacttccgaaggaagtggagcgggttaccttcaatgcaatcaccaagcagacggtgacc
gatgcgatgaagcgcccgcgcgagctcgaccaggacctgatcgatgcctacctcgcccgc
cgcgcgctcgattacctgttcggcttcacgctttcgccggtgctgtggcgcaagctgccc
ggcgcgaagtcggcagggcgcgtgcagtcggtggccctgcgcctcatcgtcgagcgcgag
cgcgagatcgaggttttcaaggcgcaggaatactggtcggtcattgctcggctcgagcag
ggcgggacggaatttgccgcacggctcgtcaagttcgatggccagaagctcgacaagctg
acgttgggtgacgaaggggccgcgatgaaggccaaggccgtggtcgaggctggcacgttc
cgcgtcgaggacgtcgagacgaagccgacgcgccgcaatccctatccgccgttcaccaca
tcgaccttgcagcaggaagccgcgcgcaagctcggcttctcggccagccacaccatgcgt
gtggcgcagacgctgtatgaagcgggcgcgatcacctacatgcgtaccgatggcgtgcag
atggacccgagcgcgatttcggcggcgcgcaaggcgatctcggaccggtatgacgggcat
taccttcccgaaaaaccccgtcattacgagacgaaggcgaagaatgctcaggaagcgcat
gaagccatccggccaaccgacttttcgaaggatcgctatggttcgggcgacgaggcgcgc
ctttacgacctgatctacaagcgggcgatggcgagccagatggcctctgccaatattgaa
cggaccagcgtgacgctgcgcgacgggaccggcaagcacgagctgcgcgcgacggggcag
gtggtgaagttccccggcttccttgccgtctacgaagaaggccgcgaccagaaggccgat
ggcgatgacgaggatgggagcctgctgccttcgctcaacaagggcgacacgccggccaag
cgcggtgtcgatgcaacgcagcactttacccagccgccgccgcgctattcggaagccagc
ctggtgaagcgcctagaggaactgggcattggccggccctcgacgtatgccgcgacgctg
caggtgctcaaggaccggaactacgttcggaccgagaaaaaccgtttcttcgcagaggaa
tcgggccgacttttgacatcgtttcttgaacgcttcttcacccgctacgtggcttacgag
ttcactgcgggcatggaagaggagcttgacgatgtgtcgggcgggcgtgccgaatggaag
aaggtgcttgccgagttctggcgcgacttcaagcccaagtccgacgaggtgatggagaag
aagccgagcgaggtgacggccgagctggacgaattcctttccgactacctcttcccgccg
cgcgaggacggcagcgatccgcggctttgtcccaagtgcgaggcgggacgcctttcgctg
cgcggtggacgttacggggcgttcgtcgcctgctcgaactatccggagtgcaagtacacc
cgcaagtttgcgcagcccggcggatcagacggtgacggtggcgaggacggcgttctgggc
aaggatcctgagaccggacttgaagtcgtgcgcaaggctggccgcttcggtccctacatc
cagttgggtgagggcaaggaggccaagcgtgcgtcgatccccaaggacattggcgaactc
gatctggagtgggcgctcaagctgctgtctctgccgcgtgaggtgggcaagcatcctgaa
agcggcaatccgatcacggcgagcattggccgctacgggccctatctcgcacatgacggc
aagtacgcgaggctgaagtcaacaagcgaagtgttcgagaccggaatgaatgctgccgtc
atgcatctcgctgcggcagcagcgggcgcgggtgcgcgtgggggccggacggcagccgaa
ccgctcaaggtttttggtgcacacccgacgtctggcggtgagatcaagctgatggcgggg
cgctatggtccctatgtcaccgatggcaccaccaatgcgactttgccgaaggacaagcag
cccgaagccctgacgctggaagaggcgatcaccctgatcgacgagcgggctgccaagggc
ccggccaagggcaagaagggcgcgaagaaggccccggccaagaaggcggccccaaagaag
gacgcgccgaaaaaggaagcggccaagaagccagcggcaaagaaagcgccggcgaagaag
gttgcgaaaagcgccgagtaa
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