Novosphingobium sp. ES2-1: IM701_09360
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Entry
IM701_09360 CDS
T10689
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
novo Novosphingobium sp. ES2-1
Pathway
novo03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
novo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
IM701_09360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
novo03400
]
IM701_09360
DNA repair and recombination proteins [BR:
novo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
IM701_09360
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
QOV92876
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Position
complement(1940790..1941644)
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AA seq
284 aa
AA seq
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MAARAYWQGQLRLALVSIPVEIYPATRSGAAISFHQIHEPSGKRIRYEKVAPGVGPVDRE
EIVKGYEVSRGNYVLLDDEEIESVRIESRKTLELVQFVGSDEIDVLYYEKPYFVVPADDL
AEDAYIVLREALRKTRTVGLGQLSVRGREQFVSLKPCGRGLILEVLRYADEVQRAHNWFR
DIPARDADPELLDLAASLIEKKTAKFAPDKFHDRYVDALHALIEKKIKAKGERIIEDPDA
DEAPRGGNVIDLMAALKQSLGHDDEDADEGRPRKRASPPRRKRA
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atggccgctcgcgcatactggcaagggcaattgcgccttgccctggtttcgatcccggtc
gaaatctatccggccacgcgaagcggtgcggccatttcatttcaccagatccacgaaccc
agcggcaagcgcatccgctacgagaaagtggcgcccggcgtcggtccagtcgatcgcgag
gagatcgtgaagggctacgaggtatcacgcggcaattacgttctgctcgatgacgaggag
atcgaatccgtgcgcatcgaaagccgcaagacgctcgaactcgtccagtttgtcggttcg
gacgaaatcgatgtgctctattatgaaaagccctattttgtcgtgccggccgatgacctt
gcagaggatgcctacattgtccttcgtgaggcgctcagaaagacgagaactgtcgggctg
ggacaactctcggtccgtgggcgcgagcagttcgtttcgctcaaaccgtgcgggcgcgga
cttatcctcgaggttctgcgctatgctgacgaggtacagcgcgcgcacaactggttccgc
gatattcccgcacgtgacgccgaccccgagcttctcgatctggcagccagcctgatcgag
aagaagacggcgaagtttgcgcccgacaagttccatgaccgctatgtcgatgcactccac
gcgctgatcgaaaaaaagatcaaggcgaagggggagcgcattatcgaggatcccgatgct
gacgaggctccgcgtggtggcaacgttatcgacctgatggcagcgctcaagcaatcgctg
ggacacgacgacgaagacgccgacgagggcagaccccgcaaacgcgcatctccaccgcgc
cgcaagcgggcttga
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