Novosphingobium sp. ES2-1: IM701_10620
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Entry
IM701_10620 CDS
T10689
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
novo Novosphingobium sp. ES2-1
Pathway
novo03030
DNA replication
novo03430
Mismatch repair
novo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
novo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
IM701_10620
03430 Mismatch repair
IM701_10620
03440 Homologous recombination
IM701_10620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
novo03032
]
IM701_10620
03400 DNA repair and recombination proteins [BR:
novo03400
]
IM701_10620
Enzymes [BR:
novo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
IM701_10620
DNA replication proteins [BR:
novo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
IM701_10620
DNA repair and recombination proteins [BR:
novo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
IM701_10620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_gamma3
DNA_pol3_delta2
DUF3646
DNAX_ATPase_lid
AAA
AAA_5
AAA_22
RuvB_N
AAA_assoc_2
AAA_30
AAA_16
AAA_19
AAA_14
Cdc6_lid
AAA_18
AAA_24
DUF815
Glyco_tranf_2_5
PIF1
RCF1-5-like_lid
Motif
Other DBs
NCBI-ProteinID:
QOV93101
LinkDB
All DBs
Position
complement(2189805..2191646)
Genome browser
AA seq
613 aa
AA seq
DB search
MADSTDMFGDPPQEEENKPSAAELEAAGQSSMFGDPAPVAAPVAPAPAPAEVVRETAPPP
PVAPAAASAAQPYRVLARKYRSQTFAELIGQDAMVQTLANAIKRDRLAHAFLMTGVRGVG
KTSTARLIAKALNCIGPDGQGGPTIDPCGSCEPCRAIAEGRHIDVIEMDAASNTGVDDVR
EIIEAVRYAAVSARYKIYIVDEVHMLSRNAFNALLKTLEEPPAHVKFLFATTEVDKLPVT
VLSRCQRFDLKRIPAPLLASHFGMICGKEGVEAEDEALAMIAAAAEGSVRDGLSILDQAI
SHADLVGSEDGKTRVTAEQVRQMLGLADKTMQRRLLDAVLSGKGGTVLEEVAQQYALGIE
PIAMMRAQMDVVHRVTVTQIGGVGPDIRSTEEREALEGWAKALSAGQLHRLWQLLLKGYE
EVKVAPDPLVAAQMALLRVMHAADLPDPSGLVKKLEEIASRPVVMAQTAEPGAVAAPVAQ
ATAAPAMDWEALVEQVEHVSPLVGSTMRLGVRVVELKAGLLRYQLAPGLPNDPAADIRRA
LNHVTGEAWIVERGEGDALPSLEEAKAEKVAAADAAMKEDPLVKAALEAFPGAVIIDEES
SREHEKRPWSKRA
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atggccgattccaccgacatgtttggcgatcctccgcaagaggaggagaacaagccctct
gctgccgagctcgaggcggcgggccaaagttcgatgttcggcgatccggcgccggtcgca
gcgcctgtagcgcctgctccggctcctgcagaagtggtgcgggagacggcgccaccgcca
ccggtcgcgcccgcagcggcatctgctgcgcaaccctatcgcgtgctggcgcgcaagtac
cggtcgcagacctttgccgaactgatcgggcaggacgcgatggtgcagacgctggccaac
gcgatcaagcgtgaccggctggcccatgccttcctgatgaccggcgtacgcggtgttggc
aagacttccaccgcgcgcctgatcgccaaggcgctcaactgcattggcccggacgggcag
ggcgggcctacgatcgatccgtgcgggtcttgcgaaccatgccgggcgattgccgaaggc
cgacacatcgacgtgatcgagatggacgcggcgtcgaacactggcgtcgacgacgtgcgc
gagatcatcgaggcggttcgctatgcggcggtttcggcgcgctacaagatctacatcgtc
gacgaagtccacatgctgtcgcgcaatgctttcaacgccttgctcaagacgcttgaggaa
ccgccggcgcatgtgaagttcctctttgcgacgaccgaagtggacaagctgccggtcacg
gtcttgtcgcgctgccagcggttcgatctcaagcgcattccggcgccgctgctcgccagc
cacttcggcatgatctgcggcaaggaaggtgtcgaggccgaggacgaggcgctggcgatg
atcgccgctgccgccgaaggttcggtgcgcgatggcctttcgatccttgatcaggcgatc
agccatgccgatctggttggcagcgaggatggcaagacccgggtaacggccgagcaggtc
cggcagatgctgggccttgccgacaagaccatgcagcgccggctgctcgacgccgtgctt
tcgggcaagggcgggacggtgctggaggaagtggcgcagcagtatgcgctggggatcgag
ccgatcgcgatgatgcgggcgcagatggatgtggtccatcgggtgacggttacgcagatc
ggcggcgtggggccggacatccgctcgaccgaggagcgggaggctctcgagggctgggcc
aaggcgctttcggcggggcagttgcaccggttgtggcagctgctgctcaagggttacgag
gaagtgaaggtggcgcctgatccgctggtggcggcgcagatggcgctgttgcgggtgatg
cacgcggcggacctgcccgatcccagcgggctggtgaagaagctggaagagattgcttcc
cggcccgtggtcatggcgcagaccgccgaaccgggcgctgtcgcggctcccgtggcgcaa
gcgaccgcggcgcccgcgatggactgggaagcgctggtcgagcaagtcgagcatgtctcg
ccattggtcggatcgacgatgcggctgggcgtgcgggtggttgaactcaaggccggtttg
ctgcgctatcaactggcgccgggattgccgaacgatccggcggcggatatccgccgcgcg
ttgaaccacgtgaccggcgaggcatggatcgtcgagcgcggggagggcgatgccctgccc
agcctcgaggaagccaaggccgagaaggtggcggcggcggacgcggcgatgaaggaagat
cccttggtcaaggcggcgctcgaagcctttccgggcgcggtgatcattgatgaggaaagc
tcgcgagagcacgaaaagagaccctggagcaaacgcgcatga
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