KEGG   Novosphingobium sp. ES2-1: IM701_10785
Entry
IM701_10785       CDS       T10689                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
novo  Novosphingobium sp. ES2-1
Pathway
novo00010  Glycolysis / Gluconeogenesis
novo00020  Citrate cycle (TCA cycle)
novo00260  Glycine, serine and threonine metabolism
novo00280  Valine, leucine and isoleucine degradation
novo00310  Lysine degradation
novo00380  Tryptophan metabolism
novo00620  Pyruvate metabolism
novo00630  Glyoxylate and dicarboxylate metabolism
novo00640  Propanoate metabolism
novo00670  One carbon pool by folate
novo00785  Lipoic acid metabolism
novo01100  Metabolic pathways
novo01110  Biosynthesis of secondary metabolites
novo01120  Microbial metabolism in diverse environments
novo01200  Carbon metabolism
novo01210  2-Oxocarboxylic acid metabolism
novo01240  Biosynthesis of cofactors
Module
novo_M00009  Citrate cycle (TCA cycle, Krebs cycle)
novo_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
novo_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
novo_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:novo00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    IM701_10785 (lpdA)
   00020 Citrate cycle (TCA cycle)
    IM701_10785 (lpdA)
   00620 Pyruvate metabolism
    IM701_10785 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    IM701_10785 (lpdA)
   00640 Propanoate metabolism
    IM701_10785 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    IM701_10785 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    IM701_10785 (lpdA)
   00310 Lysine degradation
    IM701_10785 (lpdA)
   00380 Tryptophan metabolism
    IM701_10785 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    IM701_10785 (lpdA)
   00670 One carbon pool by folate
    IM701_10785 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:novo04147]
    IM701_10785 (lpdA)
Enzymes [BR:novo01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     IM701_10785 (lpdA)
Exosome [BR:novo04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   IM701_10785 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_oxidored FAD_binding_2 HI0933_like GIDA NAD_binding_8 AlaDh_PNT_C FAD_binding_3 Lys_Orn_oxgnase Thi4 DAO DUF7759 Amino_oxidase Dicer_PBD
Other DBs
NCBI-ProteinID: QOV93129
UniProt: A0A7M2X649
LinkDB
Position
2230222..2231622
AA seq 466 aa
MAEYDYDVLVIGGGPGGYVAAIRAAQLGLKTACAEGRETLGGTCLNVGCIPSKALLHGSE
KFDEAKNGTFASYGIKTGAVELDLDAMQAQKADSVKGLTGGIEFLFKKNKVTWLKGYATF
EDAHSVTVAGQKVTAKNIVIATGSSVTPLPGVTVDNDAGVIVDSTGALALNRVPNHMVVI
GGGVIGLELGSVWRRLGAKVTVVEFLDQLLPGMDGDVRKEAAKIFKKQGMDIKLGTKVTG
VAVEGGKATLTVEPAKGGEAATIEADCVLVAIGRRPNVDGLGLDKIGLELNARGQIETDH
DFATKVPGVWAVGDVIPGPMLAHKAEDEGIAVAENIAGLTGIVNHDVIPGVVYTMPEFAG
VGLTEEAAKEKGEIKVGKFPMLANSRAKTNHEPDGFVKVISDAKTDRVLGVWCIASVAGT
MIAQAAQAMEFGATSEDIAYTCHAHPTHSEALKEAAMAVTGKPIHM
NT seq 1401 nt   +upstreamnt  +downstreamnt
atggctgaatacgattacgacgtccttgtcatcggtggtggccccggcggttacgtcgcg
gcgatccgcgcggcgcagctggggctgaagaccgcttgcgccgaagggcgcgagacgctg
ggcgggacctgcctcaacgtcgggtgcattccgtcgaaggcgctgctgcacgggtcggag
aaattcgacgaggcgaagaacggcacgttcgccagctatgggatcaagaccggcgctgtc
gagctggatctggatgcgatgcaggcgcagaaggcggattcggtcaagggcctcaccggc
ggcatcgagtttctgttcaagaagaacaaggtgacctggctcaagggctacgccacgttc
gaggacgcgcacagcgtgaccgtggcgggccagaaggtgaccgcgaagaacatcgtgatc
gccaccggttcgagcgtgacgccactgccgggcgtgacagtggacaacgatgcgggcgtg
attgtcgacagcaccggtgcactggcgctgaaccgcgtaccgaaccacatggtggtcatc
ggtggcggcgtgatcgggctcgagcttggttcggtgtggcgccgccttggcgcgaaggtc
acggtcgtcgaattcctcgaccagttgctgcccggcatggacggcgacgtgcgcaaggaa
gcggccaagatcttcaagaagcagggcatggacatcaagctcggcacgaaggtgaccggc
gttgcagtggaaggcggaaaggccacgctgacagtcgagcctgcaaagggtggcgaggcg
gcgaccatcgaggccgactgcgtgctggtggcaatcgggcgccgtcccaatgtcgatggc
ctcggcctcgacaagattgggctggagctgaacgcgcgcggccagatcgagaccgaccac
gactttgccaccaaggttccgggcgtatgggccgtgggcgacgtgatccccggtccgatg
ctggcgcacaaggccgaggacgaaggcattgccgtggccgagaacattgccgggctcacg
ggcatcgtgaaccacgacgtgatcccgggcgtggtctacaccatgccggagttcgcgggc
gtggggctcacggaagaggcggcgaaggaaaagggcgagataaaggtcggcaagttcccg
atgctcgccaacagccgtgccaagaccaaccacgagccggacggcttcgtgaaggtcatc
tcggacgccaagacggaccgcgtgctgggcgtatggtgcatcgcctcggttgccggcacg
atgatcgcgcaggccgcgcaggcgatggagtttggtgcgaccagcgaggacatcgcctat
acctgccacgcgcacccgacccattcggaagcgctgaaggaagcggcgatggccgtgacg
ggcaagccgatccacatgtga

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