Novosphingobium sp. ES2-1: IM701_11495
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Entry
IM701_11495 CDS
T10689
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
novo Novosphingobium sp. ES2-1
Pathway
novo03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
novo00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
IM701_11495 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
novo03011
]
IM701_11495 (rpsA)
Ribosome [BR:
novo03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
IM701_11495 (rpsA)
Bacteria
IM701_11495 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
SH3_16
RNase_II_C_S1
CsrA
RuvA_N
MazE_antitoxin
Motif
Other DBs
NCBI-ProteinID:
QOV93250
LinkDB
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Position
2365337..2367043
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AA seq
568 aa
AA seq
DB search
MATNPSRDDFAALLDESLGGAANGGFEGRVVKGTITAIENDKAVIDVGLKSEGRVALREF
AAPGQAHGLKVGDEVEVYVDRVENADGEAMLSRDRARREAAWDKLENEFGEGKRVEGVIF
GRVKGGFTVDLDGAVAFLPGSQVDIRPVRDVTPLMDMPQPFQILKMDRRRGNIVVSRRAV
LEETRAEQRSGLIQNLKEGQIIDGVVKNITDYGAFVDLGGIDGLLHVTDMSYKRVNHPSE
VIAIGDTVKVQIIRINQDTQRISLGMKQLESDPWDGVAAKYPVGAKLSGTVTNITEYGAF
VELEAGIEGLVHVSEMSWTKKNVHPGKIVSTSQEVDVLVLEVDSDKRRISLGLKQAQQNP
WEAFAEKHPVGSTVEGEVKNATEFGLFIGLDGDVDGMVHMSDIAWGISGEDALALHRKGE
QVSAVVLDVDVEKERISLGMKQLEKGAPAAGGVSAAGAGSLRRGEVVTVTVLEVRDGGLE
VQAGEDGATGFIKRSDLGRDRDEQRPDRFQVGQKLDAMVTGFDRSKKPNFSVKARQLAEE
KEAVEQYGSSDAGASLGDILGAALKAKQ
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atggctaccaacccgtcgcgcgacgatttcgccgcgctgcttgacgaatcgcttggcgga
gccgccaacggtggcttcgaaggccgcgtcgtcaagggcaccatcaccgccatcgaaaac
gacaaggccgtcatcgacgtgggcctgaagagcgagggccgcgttgccctgcgcgaattc
gctgccccgggccaggcgcacggcctcaaggtcggcgacgaagtcgaagtctacgtcgac
cgcgtagagaacgccgatggcgaagccatgctgtcgcgtgaccgcgcccgccgcgaagcc
gcgtgggacaagctcgagaacgaattcggcgaaggcaagcgcgttgaaggcgtgattttc
ggccgcgtgaagggcggcttcaccgtcgaccttgacggcgccgttgccttcctccccggc
agccaagtcgacatccgtccggtccgcgacgtgaccccgctgatggacatgccgcagccg
ttccagatcctcaagatggaccgccgccgcggcaacatcgtcgtctcgcgccgtgcggtg
ctggaagaaacccgcgccgaacagcgctcgggcctgatccagaacctcaaggaaggccag
atcatcgacggcgtcgtcaagaacatcacagattacggtgcgttcgtggacctcggcggc
atcgacggcctgctccatgtcaccgacatgagctacaagcgcgtcaaccacccgtcggaa
gtcatcgccattggcgataccgtcaaggtgcagatcatccgcatcaatcaggatacgcag
cgcatcagcctcggcatgaagcagcttgaaagcgatccgtgggatggcgttgccgccaag
tacccggtcggcgcgaagctctcgggcactgtcaccaacatcaccgaatacggtgcgttc
gtggaactcgaagccggcatcgaaggcctcgtccatgtttcggaaatgtcctggaccaag
aagaacgtccaccccggcaagatcgtctcgacctcgcaggaagtcgacgtgctggttctg
gaagtcgacagcgacaagcgccgcatcagcctcggcctcaagcaggcccagcagaacccc
tgggaagccttcgccgaaaagcacccggtcggttcgaccgtggaaggcgaagtcaagaac
gcgaccgaattcggcctgttcatcggcctcgatggcgacgtggacggcatggtccacatg
tccgacatcgcctggggcatctcgggcgaagacgcgctggctctgcaccgcaagggcgag
caggtttcggccgtggttctcgatgtcgacgtcgagaaggaacgcatcagcctcggcatg
aagcagcttgaaaagggcgctccggctgctggtggcgtttcggctgctggcgctggctcg
ctgcgtcgcggcgaagtcgtcaccgtcaccgttctcgaagtccgcgacggcggcctcgaa
gtgcaggctggcgaagacggcgcaaccggcttcatcaagcgctcggatctgggccgcgac
cgtgacgaacagcgtccggaccgcttccaggtcggccagaagctcgacgccatggtcacc
ggcttcgatcgttcgaagaagccgaacttctcggtcaaggcccgccagctggccgaagag
aaggaagccgtggaacagtacggctcgtcggatgccggcgcatcgctgggcgacatcctc
ggcgccgctctgaaggcgaagcagtaa
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