Novosphingobium sp. ES2-1: IM701_13990
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Entry
IM701_13990 CDS
T10689
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
novo Novosphingobium sp. ES2-1
Pathway
novo03030
DNA replication
novo03410
Base excision repair
novo03420
Nucleotide excision repair
novo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
novo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
IM701_13990 (polA)
03410 Base excision repair
IM701_13990 (polA)
03420 Nucleotide excision repair
IM701_13990 (polA)
03440 Homologous recombination
IM701_13990 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
novo03032
]
IM701_13990 (polA)
03400 DNA repair and recombination proteins [BR:
novo03400
]
IM701_13990 (polA)
Enzymes [BR:
novo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
IM701_13990 (polA)
DNA replication proteins [BR:
novo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
IM701_13990 (polA)
DNA repair and recombination proteins [BR:
novo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
IM701_13990 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
IM701_13990 (polA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DprA_N
HHH_2
HHH_5
HAMP_N3
Motif
Other DBs
NCBI-ProteinID:
QOV93681
LinkDB
All DBs
Position
complement(2855651..2858488)
Genome browser
AA seq
945 aa
AA seq
DB search
MSEKQHLYLVDGSAYIFRAYHRLPPLTNPQGTPVGAVYGYTTMLWKLAEDLHKADGPTHL
AVILDKAGTSFRNDLYDQYKANRPPPPEDLVPQFPLIRDATRAFSLACIEEDALEADDLI
ASYARAATLRGWDVTIVSSDKDLMQLVGKCATGGGCIDMLDTMKNQRIDIPEVVEKFGVP
PEKVGDVLALMGDSVDNVPGIRGIGPKTATKLIQEYGDLESALAAAPAMKASKLRESLIE
QAEMARLSRVLVQLKEDCPLPIPIEDFALGQIPRDPLAAFLEEHGFTSLLRRLDDGKGSP
GPKTQLNPAKPENMAAPAAPAGNRQSLPSWPAVDLGAYACIQSMGELQQWIARAFEARVV
AIDTETSALDAMRASLVGVSLALGPNDACYIPLGHGGADMFAERPVQIDRAEALAALKPL
LESDAVLKVGQNIKYDINILARQGVHVAPIDDTMVMSFCLDAGRSETGLAGHGMDELAER
HLLHTTMKFKDLCGTGKKAISFAEVPLADATRYAAEDADVTWRLHRLFQPRLVDEAGMRI
YQKVDRPLVPVVAMMERNGIKVDRERLSSLSTEFAAQIARLESVIFEKCGQSFTIGSPKQ
LGEILFDKLGYKGGKKGKTGQYSTDQSVLEGLAGQGAEVATLVLEWRQLSKLKSTYTDAL
QAAINPETGRVHTSYSLVGAQTGRLSSNEPNLQNIPIRTEIGRQIRDAFVAEPGNVLLAA
DYSQIELRLAAHMADVPALKEAFAAGEDIHARTAMEMFGTVDRDTRGRAKTINFAILYGI
SRWGLGGRLGVSADEAQAMIDRYFERFPGIQRYIHETLESVRECGYSQTLFGRKTWFPRI
GSKNQAERQGSERAAINAPIQGTSADIIKRAMARMMPALAEAGLPRVKMLLQVHDELVFE
LPEGDVKKARPVIERVMATAAEPAVKLSVPLGVEIGTGLSWGAAH
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaaagcagcatctctatctggtcgacgggtcggcctatattttccgcgcctat
catcgcctcccgccgctgacgaatccgcaaggaacgccggttggcgcggtctatggctat
acgacgatgctgtggaagctggccgaggacctgcacaaggcggatgggccgacgcacctt
gctgtcattctcgacaaggccggaacctcgttccggaacgacctctacgaccagtacaag
gccaaccgcccgcccccgcccgaagatctcgtcccgcagttcccgctgatccgcgatgca
acacgtgcgttcagcctcgcctgcatcgaggaggacgcgcttgaggccgatgacctgatt
gcttcctacgcgcgggcagcgacattgcgcggttgggacgtgacgatcgtttcctccgac
aaggatctgatgcaactggtcggcaagtgcgccaccggtggtggctgcatcgacatgctg
gacacgatgaagaaccagcgcatcgacatccccgaagttgtcgagaagttcggcgtgccg
ccggaaaaggtcggtgacgtcctggcgcttatgggcgattcggtcgacaacgtgcccggc
attcgcggcatcggcccgaagaccgccaccaagctgatccaggaatacggcgatctcgaa
tccgcgctggctgcggcccctgcgatgaaggcgagcaagctgcgcgagagcctgatcgag
caggccgagatggcccgcctttcccgcgtgctggtgcaactcaaggaagattgcccgctg
ccgattccgatcgaggactttgccctcggccagatcccccgcgatccgcttgcagcgttt
ctggaggaacacggtttcaccagcctgctgcgtcgtcttgacgacggcaagggcagcccg
gggccaaagacccagctcaatcccgccaagcccgaaaacatggcggctccggccgcacct
gcgggcaaccggcagtcgctgccgtcatggccggcggtggatcttggcgcctacgcctgc
atccagtcgatgggcgagctgcagcagtggattgcgcgggcgttcgaagcgcgggtggtg
gcgatcgatacggaaacgagcgcgcttgacgcaatgcgcgccagcctggtcggcgtgagc
cttgcgcttgggccgaacgatgcctgctacattccgctcggccacggcggcgcagacatg
tttgcggaaaggccggtgcagatcgatcgcgcagaggcattggccgcactgaagccgctc
ctggaaagtgacgcggtgttgaaggtcggccagaacatcaaatacgacatcaacatcctt
gcgcgccagggcgtccatgtcgcgccgatcgacgataccatggtgatgagcttctgcctt
gatgccggacgcagcgagaccggccttgccggccacggcatggacgaactggcagagcgg
cacctgctgcacaccacgatgaagttcaaggacctgtgcggcaccggcaagaaggcgatc
tcgttcgccgaagtgccgctggccgacgccacgcgctatgccgcagaggacgccgacgtc
acgtggcgcctgcatcgcctgttccagccgcggctggtcgacgaggcgggcatgcgaatc
taccagaaggtcgatcgtccgctcgtgccggtcgtcgcgatgatggaacgcaatggcatc
aaggtggaccgcgagcggttgtccagcctctccaccgagtttgccgcgcagatcgcgcgc
ctcgaaagcgtgatcttcgagaagtgcggacagagcttcaccatcgggagccccaagcaa
ctgggcgagatcctgttcgacaagctcggctacaagggtggcaagaagggcaagaccggg
cagtactctaccgaccagtcggtgctcgaaggtctggccgggcaaggggcggaagtggcg
acgctggtgctggaatggcgccaactgtccaagctcaagtcgacctataccgatgcgctg
caggccgcgatcaatcccgagaccgggcgcgtgcacaccagctacagtctcgtcggtgcg
cagaccgggcgtctctcgtcgaacgaacccaacctgcagaacatcccgatccgaaccgag
atcggccgccagatccgcgatgccttcgttgccgagccaggcaatgtgctgctggccgcg
gactacagccagatcgaattgcgccttgccgcgcacatggccgatgtgccggcgctgaag
gaagccttcgctgccggagaggacatccacgcgcgcaccgcaatggagatgttcggcacc
gtcgatcgtgacacgcgagggcgggccaagacgatcaacttcgccatcctctacggcatc
agccgctggggcctgggggggcgtctgggcgttagcgcggacgaggcgcaggccatgatc
gaccgctacttcgaacgcttccccggcatccagcgctacatccacgaaacattggagagc
gtgcgcgagtgtggctattcgcagacgctgttcggccgcaagacgtggttcccgcgcatc
ggctctaagaaccaggccgaacggcagggcagcgagcgtgccgcgataaacgccccgatc
cagggcaccagcgccgacatcatcaagcgcgccatggcccggatgatgccggccctcgcc
gaagcaggcttgccccgcgtgaagatgctcctgcaggtccacgacgaactcgtcttcgag
ctgccggaaggcgatgtgaagaaagccaggccggtgatcgagcgggtcatggcgacggcg
gccgagcctgcggtgaagctcagtgtgccgcttggcgtggagatcggaaccggcctgtca
tggggcgcagcgcactga
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integrated database retrieval system
