KEGG   Novosphingobium sp. ES2-1: IM701_14365
Entry
IM701_14365       CDS       T10689                                 
Symbol
gspD
Name
(GenBank) type II secretion system secretin GspD
  KO
K02453  general secretion pathway protein D
Organism
novo  Novosphingobium sp. ES2-1
Pathway
novo03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:novo00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    IM701_14365 (gspD)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:novo02044]
    IM701_14365 (gspD)
Secretion system [BR:novo02044]
 Type II secretion system
  General secretion pathway protein
   IM701_14365 (gspD)
SSDB
Motif
Pfam: Secretin Secretin_N type_II_gspD_N0
Other DBs
NCBI-ProteinID: QOV93748
LinkDB
Position
2938125..2940371
AA seq 748 aa
MTLRKLLSPRMLLGAAALALAVPQAALAQYTLNVREADIRAFVADAAEVTGRTFIVDSRV
QAKISVVSDRPLSRSEYFEVFLSTLRANGLVAVPTGNGAFRIQPAEGAAANPSRIGSRGA
ALSQMVTEVIRLRAIDAAQAVETLRPLISKEGAITANKAGNSLVVVDYADNMRRIRALLA
DIDRDNAATQTVILDHAGAREIATALSQLVPAGGEGARALATVVAVDSSNAVLMRGEPAT
LAKLAAMARQLDARAATGGEIKVVWLDYADSAALVPVLERLLGGQGGGEVASASAAPVSL
GGVGGSQNSSAGTQGSTGQAAATGGSQTSPIGATSGGLGNGPIKLANGRGTATITRYPGA
NAIIIAAPADDQRRIGEVIRQLDVPQEQVLVEAIIVEISNNVAKELGVQLLFGGKDKPFA
VTNFSNSSPNIIDIAGGLLADNLNQTTTVINGDTVTTTTNSTAGDLLRENAATKALSASG
AYTGFLTELSKDTYLGALINAVQTDKNSNILSTPHITTNNNVPASILFGQDVPITTGEAL
SNGNFNDTFRTVQRQNVGIELDVTPQINAGNMVRLDLRQEVSSIAGTVSSKSDELIINKR
EIKTTVTVGDREIVALGGLLDDNEQRTLQKVPLLGDIPVVGELFKSRGRSRVKTNLMVFI
RPTILRNAADRAALAARRYGVVRQAQIEFNAKQEPTIDELIVDYMGATLPAAPSAQVAVV
APGDTLIRPRATPVPLEQTELPPSSAQN
NT seq 2247 nt   +upstreamnt  +downstreamnt
atgaccttgcgcaagctccttagcccccgaatgctcctcggagccgccgcgctcgccctt
gccgtgccgcaggccgcgctggcgcaatacacgctcaacgtgcgcgaagccgacattcgc
gctttcgtggccgatgccgccgaagtgacgggccgcaccttcatcgtcgacagccgcgtg
caggccaagatcagcgtcgtttccgaccggcctctcagccgctcggaatacttcgaggtc
ttcctctccaccttgcgcgccaacgggctggtcgctgtgccgaccggcaacggcgcgttc
cgcattcagcctgccgaaggggcagccgccaatccctcgcgcatcggcagccggggggcc
gcgctcagccagatggtgaccgaggtcatccggctgcgcgccatcgacgctgcgcaagcg
gtcgagaccctgcgcccgctgatcagcaaggaaggcgcgatcaccgcgaacaaggctggc
aattctctggtcgtcgtcgattacgccgacaacatgcgccgcatccgcgcgctgctcgcc
gatatcgaccgcgacaacgccgccacgcagaccgtgattctcgatcatgccggcgctcgt
gagatcgccacggcgttgagccagctggtcccggcagggggcgaaggcgcgcgtgcgctg
gccacggtcgtcgcggtggacagctccaatgccgtgctgatgcgcggtgaaccggcaacg
ctggcaaagcttgcggccatggcccgccagctcgacgccagggccgcgaccgggggcgag
atcaaggtcgtctggctcgactacgccgattccgccgcgctcgtgccggttctcgaacgc
ctgctcggcggccagggcgggggcgaagtggcttcggccagcgccgcgcccgtatccttg
ggcggcgtcggcggcagccagaactcgagcgcgggcacgcaaggttcgaccggacaggcc
gctgcaaccggcggcagccagaccagtccgatcggcgcaacctcgggcgggctcggcaat
ggtccgatcaagcttgccaacgggcgcggcacggccacgatcacccgctatcccggtgcc
aacgcgattatcatcgccgcgcctgccgatgatcagcgccgcatcggcgaggtgatccgg
cagcttgacgtgccgcaggagcaggtgctggtcgaagcgatcatcgtcgagatttcgaac
aacgtggcgaaggaactcggcgtccagctgctgttcggcggcaaggacaagcccttcgcc
gtgaccaatttctccaactcctcgcccaacatcatcgacatcgctggcgggcttctggcc
gacaatctcaaccagacgaccacagtgatcaatggcgacaccgtcacgacgacaaccaac
agcacggccggcgacctgctgcgcgagaacgccgctacgaaggcgctttccgcaagcggt
gcctacaccggcttccttacagagctgtccaaggacacctatctcggtgcgctgataaac
gctgtgcagaccgacaagaactcgaacatcctgtccaccccgcacatcaccaccaacaac
aacgtacccgcatcgattctcttcgggcaggacgtgccgatcaccaccggcgaagcgctt
tcgaacggcaatttcaacgataccttccgcaccgtgcagcgccagaatgtcggcatcgag
ctggacgtgaccccgcagatcaatgccggaaacatggtaaggctcgatctgcgccaggaa
gtcagctcgatcgcaggcacggtctcgagcaagtcggacgagctcatcatcaacaagcgc
gagatcaagaccaccgtgaccgtgggcgaccgcgagatcgtcgcactgggcggtttgctt
gacgacaacgagcagcgcacgctgcagaaggtgccgctgctcggcgacattccagtggtg
ggcgaactgttcaagtcgcgcgggcgcagccgggtcaagaccaacctgatggtcttcatt
cgcccgaccatcctgcgcaatgcggccgaccgggcggcgcttgccgcgcggcgctatggc
gtggtccgccaggcgcagatcgaattcaacgccaagcaggagccgacaatcgacgaattg
atcgtcgactacatgggcgcaacgcttcccgccgcaccttcggcgcaagtcgcggttgtc
gctccgggcgacacgctgatccgcccgcgcgccacgccggttccgcttgaacagaccgaa
cttccgccgagcagcgcgcagaactga

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