Novosphingobium sp. ES2-1: IM701_14580
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Entry
IM701_14580 CDS
T10689
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
novo Novosphingobium sp. ES2-1
Brite
KEGG Orthology (KO) [BR:
novo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
novo03032
]
IM701_14580 (gyrB)
03400 DNA repair and recombination proteins [BR:
novo03400
]
IM701_14580 (gyrB)
Enzymes [BR:
novo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
IM701_14580 (gyrB)
DNA replication proteins [BR:
novo03032
]
Prokaryotic type
DNA Topoisomerases
IM701_14580 (gyrB)
DNA repair and recombination proteins [BR:
novo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
IM701_14580 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
GyrB_insert
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
QOV93782
LinkDB
All DBs
Position
complement(2980146..2982650)
Genome browser
AA seq
834 aa
AA seq
DB search
MSSTNENTPNTNAYGADSIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVFEVSDNAIDEA
LAGHCDLVLIELNPDGSVSVEDNGRGIPTDIHAEEGVSAAEVIMTQLHAGGKFENTSDDN
AYKVSGGLHGVGVSVVNALSEWLELTIWRDGKEHWMKFAHGDAVAPLEVRGPAPEGKKGT
RVTFQASHETFKNVLEFDFDKLEHRYRELAFLNSGVRIMLRDKRHEEVKEHDLYYEGGIA
AFVKYLDRNKQPLMPEPVAISANRDGIGIDVALEWNDSYYENVLCFTNNIPQRDGGTHLA
AFRAALTRTLNGYAERSGLLKKEKVSLTGDDMREGLTAIVSVKLPDPKFSSQTKDKLVSS
EVRQPLESLMADKMVEWLEENPGHAKAIVQKVIDAAAAREAAKRARELTRRKGAMDIASL
PGKLADCQERDPAKCELFLVEGDSAGGSAKQGRDRKTQAILPLKGKILNVERARFDRIIG
SKEVGTLIQAMGTGLRDEFNIDKLRYHKIVIMTDADVDGAHIRTLLLTFFHRQMPEIIKA
GHLFIAQPPLYKVAKGRSEVYLKDNAAMDRYLVEAGLSGRILETAGGARSGPDLEALVDH
ALRMRNLMGFVPRRYNPSIIEALALSGALEPEMDAEQRDAALAKAADWLNRGDTEARWSV
VVSEEGGYHVQRLWRGVTDHHMIEAGFLVSAEARKLAKLAAENAEVYAGMARLVRATAAE
AEPAPVLAEGDDEAPAAPAAKVKDAITRPSELLDAVFAGGRKGLSIQRYKGLGEMNAEQL
WETTLDPDNRSLLQVKVEDADVTDEIFTRLMGDVVEPRRDFIQENALNVANLDV
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagcaccaacgaaaacacacccaacaccaacgcctatggcgccgattccatcaag
gtcctgaaaggcctcgatgcggtgcgcaaacgccccggcatgtacatcggcgataccgac
gatggttcgggcctgcaccacatggttttcgaggtttccgacaacgcgatcgacgaggct
ttggccggtcactgcgatctggtgctgatcgaattgaaccccgatggctcggtctcggtg
gaagacaacgggcgcggcatcccgaccgacattcacgccgaagagggcgtctctgcggcc
gaggtcatcatgacccagcttcacgcgggcggcaagttcgagaatacctcggacgacaac
gcctacaaggtttcgggcggcctccatggcgtcggcgtgtcggtggtcaatgcgctgtcg
gaatggctggagctgacgatctggcgtgacggcaaggagcactggatgaagttcgcgcac
ggcgatgccgttgcgccgctcgaggtgcgcgggccggcgccggaaggcaagaagggcacg
cgcgtgaccttccaggcgagccacgagacgttcaagaacgtgcttgagttcgatttcgac
aagctcgaacaccgctaccgtgagctcgccttcctcaattcgggcgtgcgcatcatgctg
cgcgacaagcggcacgaggaagtgaaggagcacgatctctattacgaaggcggcatcgcg
gccttcgtgaagtatctcgaccgcaacaagcagcccctgatgcccgagcctgtggcgatc
tccgccaaccgcgatggcatcggcatcgacgtcgcgctcgaatggaacgacagctactac
gaaaacgttctgtgctttaccaacaacatcccgcagcgcgatggcggcacgcacctggcg
gcgttccgcgcggcgctgacccgcacgctgaacggctatgccgagcggtcgggcctgctc
aagaaggagaaggtcagccttaccggcgacgacatgcgcgaaggcctcaccgccatcgtc
tcggtcaagctgcccgatccgaagttctcctcgcagaccaaggacaagctggtttcgtcg
gaagtgcgtcagccgctcgaaagcctgatggccgacaagatggtcgaatggctggaggaa
aatcccggccacgccaaggccatcgtgcagaaggtgatcgacgccgccgccgcacgcgaa
gcggccaagcgcgcccgtgagttgacccgacgcaagggcgcgatggacatcgcctcgctg
ccgggcaagttggcggactgccaggagcgcgatccggccaagtgcgaactgttcctggtc
gagggtgactcggcaggtggttcggccaagcaggggcgcgatcgcaagacgcaggcgatt
ctgcccttgaagggcaagatcctcaacgtggagcgagcccgcttcgatcgcatcatcggc
tcgaaggaagtcggcacgctgatccaggcgatgggcactggcctgcgcgatgaattcaac
atcgacaagctgcgctatcacaagatcgtgatcatgaccgacgccgacgtcgacggcgcg
catatccgcacgctgctgctgacgttcttccatcgccagatgcccgagatcatcaaggcc
gggcacctcttcatcgcccagccaccgctctacaaggtcgccaagggccgcagcgaggtt
tacctcaaggacaacgctgcgatggaccgctatctggtcgaggcggggctttcgggccgt
attcttgaaaccgccggtggtgcgcgcagcggccccgatctcgaggcgctggtcgaccat
gccctgcgcatgcgcaacctgatgggcttcgtgccgcgccgctataacccctcgatcatc
gaggcgctggcgctttcgggcgcgctcgagccggagatggacgccgagcagcgcgatgcc
gctctggctaaggcggcagactggctcaaccgcggcgataccgaagcgcgctggagcgtc
gtggtatcggaagagggtggttatcacgtgcagcgcctgtggcgcggggtgaccgatcat
cacatgatcgaagcgggctttctcgtcagcgccgaggcgcgcaagctggccaagctcgcc
gccgagaacgccgaggtctatgccgggatggcccgtctggtgcgcgcgacggctgccgag
gcagagcctgcgccggtcctggccgaaggggatgatgaagcacccgctgcgccggcagcc
aaggtcaaggatgcaatcacgcggccttccgaactgctcgatgcagtctttgccggtggc
cgcaagggtctgtcgatccagcgctacaagggccttggcgagatgaacgccgagcagctc
tgggaaaccacgctcgatccagacaaccgctcgctgttgcaggtcaaggtcgaggacgcc
gacgtgaccgacgagatcttcacccgtctgatgggcgacgtggtggagccgcgccgcgac
ttcatccaggaaaacgcgctcaacgtggcgaatctggacgtttga
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