Novosphingobium sp. ES2-1: IM701_14775
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Entry
IM701_14775 CDS
T10689
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
novo Novosphingobium sp. ES2-1
Pathway
novo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
novo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IM701_14775 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
novo03019
]
IM701_14775 (groL)
03110 Chaperones and folding catalysts [BR:
novo03110
]
IM701_14775 (groL)
03029 Mitochondrial biogenesis [BR:
novo03029
]
IM701_14775 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
novo04147
]
IM701_14775 (groL)
Enzymes [BR:
novo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
IM701_14775 (groL)
Messenger RNA biogenesis [BR:
novo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
IM701_14775 (groL)
Chaperones and folding catalysts [BR:
novo03110
]
Heat shock proteins
HSP60 / Chaperonin
IM701_14775 (groL)
Mitochondrial biogenesis [BR:
novo03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
IM701_14775 (groL)
Exosome [BR:
novo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
IM701_14775 (groL)
Exosomal proteins of other body fluids (saliva and urine)
IM701_14775 (groL)
Exosomal proteins of breast cancer cells
IM701_14775 (groL)
Exosomal proteins of colorectal cancer cells
IM701_14775 (groL)
Exosomal proteins of bladder cancer cells
IM701_14775 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
QOV93818
LinkDB
All DBs
Position
3023920..3025563
Genome browser
AA seq
547 aa
AA seq
DB search
MAAKDVRFSRDARERILRGVDILADAVKVTLGPKGRNVVIDKSFGAPRITKDGVSVAKEI
ELKDKFENMGAQMLREVASKANDAAGDGTTTATVLAQAIVREGMTAVAAGMNPMDLKRGI
DIAVGKVVENLKARSTPVAGSAEIAQVGIISANGDTEVGQKIAEAMEKVGKEGVITVEEA
KGLEFELDVVEGMQFDRGYLSPYFITNPEKMTVELENPYILIHEKKLSSLQAMLPILEAV
VQSGRPLLIIAEDIEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLGDIATLTAGEM
ISEDLGIKLESVTLAMLGQAKKVTIDKDNTTIVDGAGSAEEIKARVEQIRAQIEVTTSDY
DREKLQERLAKLAGGVAVIKVGGATEVEVKERKDRVDDALHATRAAVEEGIVSGGGTALL
YATKALDGLKGANDDQTKGIDIVRRAIQAPIRQIAANAGHDGAVVAGNLLRENDENQGFN
AATDTYENLKAAGVIDPTKVVRTALQDAASVSGLLITTEAAISEKPDDKPAMPPMGGGMG
GMGGMDF
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggctgccaaggacgtacgcttttcgcgcgacgctcgtgaacgcattctgcgcggcgtc
gacatcctcgccgacgcggtgaaggtcacgctgggccccaagggccgcaacgtcgtgatc
gacaagagcttcggcgcgccccgcatcaccaaggacggtgtttcggtcgccaaggaaatc
gaactcaaggacaagttcgagaacatgggcgcccagatgctgcgcgaagtggcctcgaag
gccaatgacgcagccggtgacggcaccaccaccgcgaccgttcttgcccaggcgatcgtt
cgcgaaggcatgaccgcggttgctgcgggcatgaacccgatggacctcaagcgcggcatc
gacatcgccgtcggcaaggtcgtcgagaacctcaaggcgcgttcgaccccggtcgcaggc
tcggccgaaatcgcccaggtcggcatcatctcggccaacggtgacaccgaagtcggccag
aagatcgccgaggcgatggaaaaggtcggcaaggaaggcgtgatcaccgtggaagaggcc
aagggcctcgaattcgaactcgatgtcgtcgaaggcatgcagttcgaccgcggctacctc
tcgccctacttcatcaccaacccggaaaagatgacggtcgagctcgagaacccgtacatc
ctgatccacgagaagaagctctcgtcgctccaggcgatgctgccgatcctcgaagcggtt
gtgcagtcgggccgcccgctgctgatcatcgccgaagacatcgaaggcgaagcgctggcg
accctcgtcgtcaacaagctgcgcggtggcctcaagatcgccgccgtcaaggctccgggc
ttcggtgaccgtcgcaaggccatgctgggcgacatcgccacgctgaccgccggcgaaatg
atctccgaagacctcggcatcaagctggagagcgtcacgctcgccatgctcggccaggcc
aagaaggtcaccatcgacaaggacaacaccacgattgtcgacggtgccggttcggccgaa
gagatcaaggcccgcgtcgagcagatccgtgcgcagatcgaagtcaccacttcggactac
gaccgtgagaagctgcaggagcgtctggccaagcttgctggcggcgttgccgtcatcaag
gtcggcggtgcgaccgaagtcgaagtgaaggagcgcaaggaccgcgtcgacgacgctctc
cacgccacccgcgctgcggttgaggaaggcatcgtttcgggcggcggtaccgcgctgctc
tatgcgaccaaggctctcgacggcctcaagggcgccaacgacgaccagaccaagggcatc
gacatcgtgcgccgcgcgatccaggccccgatccgtcagatcgctgcaaacgcgggtcac
gacggtgctgtcgtcgccggcaacctgctgcgcgagaacgacgagaaccagggcttcaac
gccgcgaccgacacctatgagaacctcaaggctgccggcgtgatcgacccgaccaaggtc
gtgcgcactgccctgcaggacgctgcctcggtctcgggcctgctgatcaccaccgaagcg
gcgatcagcgagaagccggacgacaagcccgcgatgccgccgatgggcggtggcatgggc
ggcatgggcggcatggacttctaa
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