Novosphingobium sp. ES2-1: IM701_15205
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Entry
IM701_15205 CDS
T10689
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
novo Novosphingobium sp. ES2-1
Pathway
novo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
novo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IM701_15205 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
novo03021
]
IM701_15205 (rho)
03019 Messenger RNA biogenesis [BR:
novo03019
]
IM701_15205 (rho)
Transcription machinery [BR:
novo03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
IM701_15205 (rho)
Messenger RNA biogenesis [BR:
novo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
IM701_15205 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
Spore_III_AA
ATPase_2
AAA_22
S1CSD-TOTE-2
AAA_25
NACHT
AAA
AAA_14
GpA_ATPase
Motif
Other DBs
NCBI-ProteinID:
QOV93891
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All DBs
Position
3107686..3108942
Genome browser
AA seq
418 aa
AA seq
DB search
MHLKELKQKTPAELVQMAEELEVEGASTMRRQDLMFAILKEMAEDGEEILGIGTIEVLPD
GFGFLRSPEANYLAGPDDIYVSPNQVRKWGLRTGDTVEGEVRAPKDGERYFAITRLIKVN
FDEPEAVRHRVNFDNLTPLYPNERLKLDTLDPTVKDKSARVIDLVSPQGKGQRALIVAPP
RTGKTVLLQNMAKAITDNHPEVFLIVLLVDERPEEVTDMQRSVKGEVISSTFDEPATRHV
QVAEMVIEKAKRLVEHKRDVVILLDSITRLGRAYNTVVPSSGKVLTGGVDANALQRPKRF
FGAARNIEEGGSLSIIATALIDTGSRMDEVIFEEFKGTGNSEIVLDRKVADKRIFPALDV
GKSGTRKEELLVPKDQLSKMWVLRRILMQMGTVDAMEFLLDKMKDSKTNEDFFATMNQ
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgcacctgaaggaactcaagcagaaaacccccgccgagctggtccagatggccgaagag
ctcgaggtcgaaggcgccagcaccatgcgccgccaggacctgatgttcgccatcctcaag
gaaatggcggaagacggcgaggaaatcctcggcatcggcacgatcgaagtcctgccggac
ggcttcggcttcctgcgcagccccgaggccaactaccttgccggccctgacgatatctat
gtttcgcccaaccaggtccgcaagtggggcctgcgcaccggcgataccgtcgaaggcgaa
gtccgcgcgcccaaggatggtgaacgctatttcgcgatcacccgcctgatcaaggtgaac
ttcgacgagccggaggccgtgcgccaccgcgtcaacttcgacaacctcaccccgctctac
ccgaacgagcgcctcaagctcgacacgctcgacccgacggtcaaggacaagtcggcccgc
gtgatcgatctggtcagcccgcagggcaagggccagcgcgcgctgatcgtcgcgccgccg
cgcaccggcaagaccgtgttgctgcagaacatggcgaaggcaatcaccgacaaccacccg
gaagtcttcctgatcgtgctgctggtcgacgaacgcccggaagaagtcaccgacatgcag
cgcagcgtgaagggcgaggtcatctcctcgacgttcgacgagcccgccacgcgccacgtg
caggttgccgagatggttatcgaaaaggccaagcgcctggtcgagcacaagcgtgacgtc
gtcatcctgctcgattcgatcactcgcctgggccgggcctacaacaccgtggtgccctcc
tcgggcaaggtgctgaccggcggtgtcgacgccaatgccctgcagcgccccaagcgcttc
ttcggtgctgcccgcaacatcgaggaaggcggctcgctgtcgatcatcgccaccgcgctg
atcgacaccggcagccgcatggatgaagtgatcttcgaagaattcaagggcaccggcaac
tcggaaatcgtgctcgaccgcaaggttgccgacaagcgcatcttccccgcgctcgatgtg
ggcaagagcggcacccgcaaggaagagctgcttgtgccgaaggaccagctctcgaagatg
tgggtcctgcgccgcatcctcatgcagatgggcactgtcgatgcgatggagttcctgctc
gacaagatgaaggattcgaagaccaacgaagacttcttcgcgacgatgaaccagtaa
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