Novosphingobium sp. ES2-1: IM701_19340
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Entry
IM701_19340 CDS
T10689
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
novo Novosphingobium sp. ES2-1
Pathway
novo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
novo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IM701_19340 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
novo03019
]
IM701_19340 (recQ)
03400 DNA repair and recombination proteins [BR:
novo03400
]
IM701_19340 (recQ)
Enzymes [BR:
novo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
IM701_19340 (recQ)
Messenger RNA biogenesis [BR:
novo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
IM701_19340 (recQ)
DNA repair and recombination proteins [BR:
novo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
IM701_19340 (recQ)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
QOV96170
LinkDB
All DBs
Position
p2:complement(265931..267730)
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AA seq
599 aa
AA seq
DB search
MNIADTAFPESEILDRLHAVFGFNAFRGVQADVVERVLAGRSTLAVMPTGAGKSLTYQLP
AVMLPGTCVVVSPLIALMHDQLRSATANGIRAATLTSVDIDRGQTIDRFLSGDLDLLYVA
PERASQPHFLEMLIRGRVAMFAIDEAHCVSEWGHDFRPDYRLLRPLMDAFPDVPRLALTA
TADRHTRADILTQLGIPEEGLIVAGFDRPNIRYAITSRDNPLRQLMTVIAENPGPGIVYA
PTRAQVEKLSQQLQASGRPVLPYHAGLDPQVRADNQARFVASEDMVMVATVAFGMGIDKP
DVRFVAHAACPKSIESYYQETGRAGRDGDPSVAVMLWGAEDFMRARQRLAEVEEHRRAGE
RTRIDALASLVETAHCRRALLLRHFGENPPPSCGNCDNCLEAPRVTDATEVARKLLSAVY
RTGQSFGFGYVEKVLTGVADDRVTQRGHDQLSVFGIVTGDEAPLLRPLARALQARGALVA
TEHGGLALGGDARAILKGEADVPLVLVPKKEGRSGRRRSGTGAALNPVGDPLFDALRNLR
RDLARENGVPPYVIFHDSVLREMAATRPGSLTELGQIGGVGSRKLDAYGDRFLEVIRQW
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
gtgaacatcgccgacaccgcattcccggaatccgaaatcctcgatcgtctccacgccgta
ttcggcttcaacgcctttcgcggcgtgcaagcggacgtggtcgagcgcgtgctggcgggt
cgctcgacgctcgccgtcatgcccaccggcgcgggcaagtcgctgacctatcagctgcca
gcggtcatgctgccgggcacctgcgtcgtcgtctcgccgctgattgcgctgatgcatgac
cagctgcgcagcgccaccgccaacggcatccgcgccgccacgctgaccagcgtagatatt
gaccggggccagaccatcgaccggttcctgtcgggcgatctcgatctgctctacgtcgcc
cccgaacgcgccagccagccgcatttcctcgagatgctcatccgcggccgcgtcgccatg
ttcgccatcgacgaggcgcactgcgtctccgagtggggccacgacttccgccccgattac
cgcctcctgcgtccgctgatggacgctttcccggacgtgccgcgcctcgcgctgactgcc
actgctgaccgccacacccgcgccgacatcctcacccagctgggcatcccggaagagggc
ctgatcgttgccgggtttgaccggcccaacatccgctacgccatcacgtcgcgcgacaat
cccttgcgccagctgatgacggtcatcgccgaaaaccccggccccggcatcgtctatgcc
cccacccgcgcgcaggtggaaaagctcagccagcagctgcaggccagcggtcgccccgtc
ctgccctatcacgccgggctcgatccgcaggtaagggccgacaatcaggcgcgcttcgtc
gcctccgaagacatggtcatggtggcgacggtcgccttcggcatggggatcgacaagccc
gacgtgcgcttcgttgcccacgccgcatgcccgaaatcgatcgaaagctattaccaggaa
accggccgtgcggggcgcgatggcgatccttccgtggcagtcatgctgtggggcgcagaa
gacttcatgcgcgcccgccagcgcctcgccgaagtcgaagagcaccgccgcgccggcgaa
cgcacgcggatcgatgcgctcgcgtccttggtcgaaaccgcgcactgtcgccgcgccctg
ctgctgcgccacttcggcgaaaacccgccaccgtcatgcggcaattgcgacaactgcctg
gaagccccgcgcgtcactgatgctaccgaggttgcccgcaagctgctctccgccgtctac
cgcaccggacagtcgtttggcttcggctacgtcgagaaagttctcacgggtgttgccgac
gatcgcgtgacccagcgcgggcacgaccagctttccgtgttcggcatcgtaaccggcgat
gaagcccccctgctgcgcccgctcgcccgcgccctgcaggcaaggggtgccttggtggcc
acggaacacggcggccttgccctgggcggcgatgcccgcgccatcctgaagggcgaagcg
gacgtgcccctcgtcctcgtgccgaagaaggaaggccgctcaggtcgccgccgcagcggt
acaggggcggcactgaaccctgtgggcgatcccctgttcgatgccctgcgcaatcttcgc
cgcgatctcgcgcgcgaaaatggcgtgcccccttacgtcatcttccacgattccgtgctg
cgcgagatggcggctacgcgcccgggcagcctcaccgaactcggccagatcggcggtgtc
ggctcgcgcaagcttgatgcctatggcgatcgtttcctcgaagtgatccggcagtggtaa
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