Nonomuraea phyllanthi: GBF35_00820
Help
Entry
GBF35_00820 CDS
T06257
Name
(GenBank) Fpg/Nei family DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
now
Nonomuraea phyllanthi
Pathway
now03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
now00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GBF35_00820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
now03400
]
GBF35_00820
Enzymes [BR:
now01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
GBF35_00820
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
GBF35_00820
DNA repair and recombination proteins [BR:
now03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GBF35_00820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Ribosomal_S13
AA_kinase
Zn_ribbon_TFIIB
NFACT_N
DUF294_C
Zn_ribbon_8
Motif
Other DBs
NCBI-ProteinID:
QFY05416
LinkDB
All DBs
Position
169103..169981
Genome browser
AA seq
292 aa
AA seq
DB search
MPELPEVESLTHFLRERAVGRTILAVDVVAVQALKTFDPPVTALGGLTVTGVSRHGKFLD
LDCDGLHLVIHLARAGWLRWRDDLSGAKPVRPGKGPLAVRVRLAPDEEGPAPGFELTEAG
TQKRLAVYVTKNPDDVPGIAALGPDPLHESFTVDALKRIVSGNRTQIKGLLRDQKVIAGI
GNAYSDEVLHAARMSPFKIASSLTDAQIADLHEAIVTTLGEAVERAHGLAAKDLKAEKKS
GLRVHNRTGQPCDVCGDTIREVSFADSSLQYCPTCQTGGKPLADRRLSRLLK
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgccggaacttcccgaagtggagtcactcacccacttcctgcgcgagcgggcggtgggc
cgcacgatcctggcggtggacgtggtggccgtgcaggcgctcaagacgttcgatccgccc
gtgaccgcgctcggcgggctgaccgtcacgggcgtgtcgaggcacggcaagttcctcgac
ctcgactgtgacggcctccacctggtcatccatctggccagggcggggtggctgcgctgg
cgcgacgacctgtccggcgccaagccggtgcgcccgggcaagggcccgctcgcggtgcgc
gtccggctggcgcccgacgaggaggggccggcgcccgggttcgagctgacggaggccggg
acgcagaagcgcctcgccgtctatgtcacgaaaaatccggacgacgtccctggcatcgcc
gccctcggccccgaccctctccacgagtccttcaccgtggacgcgctcaagcgcatcgtg
agcggcaaccgtacccagatcaaggggctgctccgcgaccagaaggtcatcgccggcatc
ggcaacgcctactccgacgaggtgctgcacgcggccaggatgtcgccgttcaagatcgcc
tcgtcgctgacggacgcgcagatcgccgacctgcacgaggccatcgtgaccacgctgggg
gaggcggtggagcgggcgcacgggctggcggccaaggacctcaaggcggagaagaagtcg
gggctgcgcgtccacaaccggacggggcagccgtgcgacgtctgcggcgacacgatccgg
gaggtgtcgttcgccgactcgtcgctgcagtactgccccacctgccagaccggcggcaag
cccctcgcagaccggcggctctcccggctgctcaaatga
DBGET
integrated database retrieval system
