Nonomuraea phyllanthi: GBF35_05440
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Entry
GBF35_05440 CDS
T06257
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
now
Nonomuraea phyllanthi
Pathway
now03420
Nucleotide excision repair
now03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
now00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GBF35_05440 (pcrA)
03430 Mismatch repair
GBF35_05440 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
now03400
]
GBF35_05440 (pcrA)
Enzymes [BR:
now01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GBF35_05440 (pcrA)
DNA repair and recombination proteins [BR:
now03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GBF35_05440 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
GBF35_05440 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_11
ResIII
DEAD
DUF3553
Beta-prop_WDR90_POC16_2nd
Motif
Other DBs
NCBI-ProteinID:
QFY14005
LinkDB
All DBs
Position
complement(1082032..1084254)
Genome browser
AA seq
740 aa
AA seq
DB search
MLDGLNPQQREAVIHHGSPLLIVAGAGSGKTRVLTHRIAYLLAEREVHPGEILAITFTNK
AAREMKERIDKLVGPRSRAMWVMTFHSACMRILRREAKRLGFPSSFSIYDQADSQRLMAM
VCREMELDPKRYPPRSFSAQVSNFKNELVDYETALDKAGSHLEKTLAQAYKAYQLKLTEA
GAMDFDDIIMNTVTLFQLFPEVAEHYRMRFRHVLVDEYQDTNHAQYILIRELVGHPELRT
ADGDVVRSGADQSELCVVGDADQSIYAFRGATIRNILEFERDYPDARTILLEQNYRSTQN
ILAAANAVIARNESRKPKNLWSDQGDGPKIVGYVADNEHDEAMFVAQEVDRLSDEEDVKP
GEVAVFYRTNAASRVFEEIFIRTGLPYKVVGGVRFYERKEVKDLLAYLRVLANPADVVSL
RRILNVPKRGIGDRAEAMIEALSTRERISFWDALRRADEAYGMATRSLNAVREFVALIEE
LIAKAEGVPPSALAEEVLVATGYRAELEASEDPQDESRLENLNELISVASEFEEANPEGT
LVEFLEQVSLVADADQIPDADGGQGVVTLMTLHTAKGLEFPVVFLTAMEDGVFPHIRSLG
EPKELEEERRLAYVGITRAQKRLYLTRAAVRSSWGAPSFNPASRFVNEVPGQLIDWRTDP
EKSAWSAATRREPAARPAPAKSGGRKVPSLAPGDRVTHDAFGLGTVVSVDGVAEKTKVKI
DFGSGGEKTLLLAYAPLEKL
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
ttgctcgacggcctcaacccacagcagcgcgaggccgtgattcatcatggcagcccgctg
ctcatcgtggcaggggcgggatccgggaagacgagggtgctcacgcatcgcatcgcctac
ctgctggccgagcgggaggtccatccgggagagatcctggcgatcacgttcaccaacaag
gccgcccgcgagatgaaggagcgcatcgacaagctggtcgggccgcgttccagggcgatg
tgggtgatgacgttccacagcgcctgcatgcgcatcctgcggcgggaggccaagcggctg
gggttcccgtcgagcttctcgatctacgaccaggccgactcgcagcggttgatggcgatg
gtctgcagggagatggagctcgatccgaagcgctacccgccgcgttcgttctcggcgcag
gtcagcaacttcaagaacgagctggtcgactacgagaccgcgctcgacaaggcgggctcg
cacctggagaagacgctcgcgcaggcgtacaaggcctatcagctcaagctgaccgaggcc
ggcgcgatggacttcgacgacatcatcatgaacacggtgacgttgttccagctgttcccc
gaggtggccgagcactaccggatgcggttcaggcacgtgctggtcgacgagtaccaggac
accaaccacgcccaatacatcctgatcagggagctggtggggcatcccgagctgcgcacg
gccgacggcgacgtggtgcggtcgggagccgaccagtccgagctgtgcgtggtgggcgac
gccgaccagtcgatctacgccttccgcggcgcgacgatccgcaacatcctggagttcgag
cgcgactatcccgacgcccgcacgatcctgctggagcagaactaccgctccacccagaac
atcctggccgccgccaacgcggtcatcgcccgcaacgagtcgcgcaagcccaagaacctc
tggtccgaccagggcgacgggcccaagatcgtcgggtacgtcgccgacaacgagcacgac
gaggccatgttcgtggcccaggaggtcgaccggctcagcgacgaggaggacgtcaagccg
ggcgaggtcgcggtcttctaccgcaccaacgccgcctcccgcgtgttcgaggagatcttc
atccgcaccggcctgccgtacaaggtggtcgggggcgtgcgcttctacgagcgcaaggag
gtcaaggacctgctggcctacctgcgcgtgctcgccaacccggccgacgtggtgtcgctg
cgccgcattctcaacgtgccgaagcgcggcatcggcgaccgcgccgaggcgatgatcgag
gcgctgtcgacgcgcgagcgcatctcgttctgggacgcgctgcgccgcgccgacgaggcg
tacggcatggccacgcgctcgctcaacgccgtgcgcgagttcgtcgcgctgatcgaggag
ctgatcgccaaggcggagggcgtgccgccgtcggcgctggccgaggaggtgctggtggcc
accggctaccgcgccgagctggaggcctcggaggacccgcaggacgagtcgcggctggaa
aacctcaacgagctcatctccgtcgcctccgagttcgaggaggccaatccggagggcacg
ctggtcgagttcctggagcaggtgtcgctcgtggccgacgccgaccagatccccgacgcg
gacggcggtcagggggtggtcacgctgatgaccctgcacacggccaaggggctggagttc
ccggtggtcttcctgacggccatggaggacggcgtgttcccgcacatccgctccctcggc
gagcccaaggagctggaggaggagcggcggctggcctacgtcggcatcacccgggcgcag
aagcggctctacctcacgcgggcggccgtccggagctcctggggggcgccgtcgttcaac
ccggcctcgcggttcgtcaacgaggtgccggggcagctcatcgactggcgcactgacccg
gagaagtcggcctggagcgcggccacccgccgcgagcccgccgcccggccggcgcccgcc
aagagcggcgggcgcaaggtgccctcgctggcgcccggcgaccgggtgacgcacgacgcg
ttcgggctgggcacggtggtgtccgtggacggggtggcggagaagaccaaggtcaagatc
gacttcggtagtggtggggagaagacgctgctgctggcgtacgcgccgctcgaaaagctc
tga
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