Nonomuraea phyllanthi: GBF35_08130
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Entry
GBF35_08130 CDS
T06257
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
now
Nonomuraea phyllanthi
Pathway
now03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
now00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GBF35_08130 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
now03019
]
GBF35_08130 (recQ)
03400 DNA repair and recombination proteins [BR:
now03400
]
GBF35_08130 (recQ)
Enzymes [BR:
now01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GBF35_08130 (recQ)
Messenger RNA biogenesis [BR:
now03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GBF35_08130 (recQ)
DNA repair and recombination proteins [BR:
now03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
GBF35_08130 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
QFY06658
LinkDB
All DBs
Position
complement(1659751..1661562)
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AA seq
603 aa
AA seq
DB search
MDTPTDVLNRVFGYDSFREGQQEIIDHVVAGGDALVLMPTGGGKSLCYQIPALVRRGVGV
VISPLIALMQDQVDALRALGVRAGFLNSTQDFDERQLVESEFLAGELDLLYLAPERLRVD
ATLRLLAKGEISVFAIDEAHCVAQWGHDFRPDYLELSTLHERWPDVPRIALTATATPATH
AEITSRLGLDQARHFVASFDRPNIHYRITPKSEPKRQLLAFLRDEHPGEAGIVYCLSRSS
VEKIAEFLADNGIAAVPYHAGLDARTRAAHQARFLREDGLVVVATIAFGMGIDKPDVRFV
AHLDLPKSVEGYYQETGRAGRDGLPATAWMAYGLQDVVQHRRMAMEGDEAHRRRQVLHLD
AMLALCETVSCRRVMLLDYFGQKGAEPCGNCDTCQAPPESWDGTVPAQKVLSTVLRLARE
RRQKFGVGQVVDILLGKKTAKVLQHGHETLTVFGVGSDLGNAEWHGVVRQLLAQRLLAVE
SDYGALVLTDDSAAVLRGQREVLLRRDALRPVRAKVATSAKAKAAVELPAEAAPLFERLR
AWRGATAKEQGVPAYVIFHDATLREIATVRPSTLAELGTVNGVGENKLAKFGEQVLEVLA
EDA
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atggatacccccaccgacgttctcaaccgcgtgttcggctacgactcgttccgtgagggg
cagcaggagatcatcgaccacgtcgtggccggcggcgacgcgctcgtcctcatgcccacc
ggcggcggcaagtcgctctgctaccagatccccgccctggtgcgccgtggtgtcggggtg
gtcatctcaccgttgatcgcgctgatgcaggaccaggtcgacgcgctgcgcgcgctcggc
gtgcgggcggggttcctcaactcgacgcaggacttcgacgagcggcagctggtcgagtcg
gagttcctggcgggcgagctcgacctgctctacctcgcccccgagcggctgcgggtcgac
gcgacgctgcggctgctggccaagggcgagatctcggtgttcgcgatcgacgaggcccac
tgcgtggcgcagtggggccacgacttccgccccgactacctcgagctgtccacgttgcac
gagcgctggcccgacgtgccgcgcatcgcgctgaccgccacggcgacgcccgccacccac
gcggagatcacctccaggctcggcctcgaccaggcccgtcacttcgtcgccagcttcgac
cggcccaacatccactatcgcatcacgcccaagagcgagccgaagcggcagttgctggcg
ttcctgcgtgatgagcatcccggcgaggcaggcatcgtctactgcctgtcgcgttcctcg
gtcgagaagatcgccgagttcctggcggacaacggcatcgccgccgtcccctaccacgcg
ggcctcgacgcccgcacccgcgccgcccaccaggcccgtttcctgcgggaggacgggctg
gtggtggtggccacgatcgcgttcgggatgggcatcgacaaacccgacgtgcgcttcgtc
gcccacctcgacctgcccaagtcggtggagggctactaccaggagaccgggcgggcgggg
cgcgacgggctgccggccacggcgtggatggcctacggcctccaggacgtcgtccagcac
cgccggatggccatggagggcgacgaggcccaccgccgccgccaggtgctccatctcgac
gcgatgctggcgctctgcgagacggtgagctgccgccgcgtgatgctgctcgactacttc
ggccagaagggcgccgagccgtgcggcaactgcgacacctgccaggcgccgccggagtcg
tgggacggcacggtccccgcccagaaggtgctgtcgaccgtgctgcggctggcccgggag
aggcggcagaagttcggggtggggcaggtggtcgacatcctgctcggcaagaagacggcc
aaggtgctgcagcacgggcacgagacgctgaccgtgttcggggtgggatccgacctgggc
aacgctgagtggcacggggtggtgcggcagctgctcgcgcagcggctgctggcggtggag
tccgactacggggcgctggtgctgaccgacgacagcgcggcggtgctgcgcgggcagcgc
gaggtgctgctgcgccgcgacgccctgcgtcccgtccgggccaaggtggcgacctccgcg
aaggccaaggctgcggtcgagctgcccgccgaggccgccccgctcttcgaacgcctccgc
gcgtggcggggggccacggcgaaggagcagggggtgcccgcgtacgtcatcttccacgac
gcgacgctgcgggagatcgcgaccgtccggccgtccacgctggccgagctgggcaccgtc
aacggggtgggcgagaacaagctggccaagttcggggagcaggtgctggaggtcctcgcc
gaagacgcctga
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