Nonomuraea phyllanthi: GBF35_08725
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Entry
GBF35_08725 CDS
T06257
Name
(GenBank) type IV secretion protein Rhs
Organism
now
Nonomuraea phyllanthi
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
TEN_YD-shell
SpvB
MurT_C
Motif
Other DBs
NCBI-ProteinID:
QFY06764
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All DBs
Position
1795528..1801713
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AA seq
2061 aa
AA seq
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MDLPSELDLPESRWNRPQEPDLPDIPDTSWNRFLEPKPESPWPRRLAAVLSMVLVLPLAY
AMPAQAAARTAPSVQKEKPVKGGKVPVRPPLPDPVEKQAWKAPPGVSWPKPQVAELGGGR
ASTLAAGFPVKLAPAKGLKAAEAADPVRVEILDSKLLGLAMRVSPGQGAKTLSAKKTRLQ
VDYSGFRYAYGGDYGARLRMVKLEECALTGADGCAAPEPVKSENDPAAGTLTAEVESAGL
YAVTAGASGQSGDLAATSLAPSAKWSVGTQSGDFSWGYGLRMPPALGGEEPDVSIAYSSQ
SVDGRTASTNNQPSWVGEGFELNPGGYVERRYKSCMIDGKKTGDMCWDQDNATLSLGDSA
MELVKDATTKQWRPKRDDGTRIEYLTGATNGDNNGEYWRVTTADGSQYTFGLNRLPGWAS
GKPVTNSVQTVPVFGNNSGEPCHSSTPANAWCQQAYRWNLDYAVDTHGNATTYWYELEKN
YYGRNMKPELGTPYVRGAYLTRIDYGYLGSELFTRAPAARVVFDVAERCLPSGSVTCAPE
QLKKETAASWPDVPFDQICDSGVKCTDRLSPTFFSRKRLTKVTTQIRTAAGQYAPVDSWA
LTHQFPATGDGMSPSLWLASIQQTGHVGGTITLPRTTFIGVQLPNRVDTNEGRAPLVKWR
VQAVNSESGGELRVNYAPAECEPGKLPAADKNTKRCFPQRWSPPNEAEVTDWFHKYVVAQ
IVEVDRVGGAPNKVTDYEYLDGAGWHYADNILVKPEHRTWADWRGYGRVRVREGDGQDTR
RTLTEFRYFRGLHGDKQADGSKRSAQVEDSEGVKMDDLDQLSGFEREETLFDGDGGAVLT
STVEEPWSVKTAESTQGGVTKAAYIVQPKSMVTRTALGGGTWRRTGEERSYDAKGLLTQV
EEQGDLADDGDDQCTRYTYARNDTSWMLDYTSRIQKVAAGCDTGVSTLAADEVISDERVQ
YDGKAYGQAPSKGDVTAVQQLASGDGATITDSTHTYDVYGRETSETDAMGTRSTMAYTPA
TGAPATEVTETNQLGHVEKIILEPAWGEPIAEIDANGKRVDMEHDALGRLVKVWQNDRSK
AAGQSPNTEYAYTVRNDGPSVVTTRTLRPDGGYTTSYELYDGLMRERQTQEPAPVDDQTQ
DPALRDGRTITDTLYNSLGEKARSNTGYFATGEPATELFAVSDTDVPNQIVSTFDGAGDV
NAQILKAKGVEQFRVSVKQEGDRVHVTPPPGGTATTRIGDADDRLVELRQYKGATPTGEY
ESTKYTYDHAGRLSTVTDPAGNVWRHHYDVRGREIRTEDPDKGVTTFTYNDADEVVSVSD
ARGKTLWYSYDELGRKKEMREGSATGPLLAEWKYDALAKGHMNAGIRYLGGQAYKAEINA
IDTAYRPLRETVTIPPREGRLAGSYVLNTRYTLDGDVQSVSFPAAGGLEDESVVYSYDAL
GQPTKVTGLSPYVSATRYSKMGETLQYELGSGSRKTWLTYTHDEATRRLTGMRLDRAGAA
STDLDLHYTYDPAGNITKIAEEAGGQDTQCFTYDHLRRMTSAWTATDDCASGAPESGTIG
GVAPYAVSYDYDVTGNRIKETRHAWGGAPETVRTSTYPEAGGKQPHALQSVGQDLFEYDA
AGNTTRRKVGASDQTLVWDAEGNLESVTEAGRTTSFVYDADGERLIRKTPDDATLYIDDM
ELRFDFAKDKVEQTRYYTINDKPVAVRTPDNQVYFMANDHQGTAQAAVNAANGELAVRRT
TPFGEDRGSPPPWWPGQRGFVGGTKDTTTGLVHLGAREYDPKNGRFISVDPVIDEQDPQQ
LNAYAYANNSPVSMSDPDGQLFWIVAAVVVRVAASVIARRLAAAAARRAALAAARAAARR
AAIAAAKRRAAALARKKALEAAKKRAAEKAKKAKEALKARRAAMKARRDARRKAAEAAAK
RRAALKARARNHRAGRVPRGVQQARSRPAHRPTSHKAAQRQSPPKVARQPAQPQPSHIWR
NDGTRQPTQSISVYRNGEMYPDGPPPPGLRPGGSGQGQKQIFRPEKVEPENTRTGTIAET
GARVTRWIDQSGLDDFFGFFF
NT seq
6186 nt
NT seq
+upstream
nt +downstream
nt
atggacctgccgagtgagttagacctgcccgaatcccgctggaaccgcccacaagaaccc
gacttaccagacattcccgacacctcgtggaaccgcttcctggagcccaagcccgagtcg
ccctggccgcgccggctcgccgccgtcctctcgatggtgctcgtcctgccgctcgcgtac
gccatgcccgcgcaggcggccgcccggacggccccgtccgtgcagaaggagaagccggtc
aagggcggcaaggtcccggtccggcccccgctgcccgatcccgtcgagaaacaggcgtgg
aaggcgccgccaggcgtcagctggcccaaaccgcaggtggcggagctgggcggcggccgg
gcgagcaccctggcggccgggttcccggtcaagctggctccggcgaagggcctgaaggcg
gcggaggccgccgatcccgtacgcgtcgagatcctggacagcaagctcctgggcctggcc
atgcgcgtgtcccccggccagggcgcgaagaccctgtccgcgaagaagacccgcctgcag
gtcgactactccggcttccgctacgcctacggcggcgactacggcgcccggctgcgcatg
gtcaagctggaggagtgcgcgctgaccggggccgacggctgcgccgcccccgagccggtg
aagagcgagaacgacccggcggccggcacgctcaccgccgaggtcgagtcggccggcctg
tacgcggtcacggcgggcgcctccggccagtcgggcgacctcgcggccacctcgctggcg
ccctcggcgaagtggagcgtcggcacccagtccggcgacttcagctggggctacggcctg
cgcatgccgcccgcgctgggcggcgaggagccggacgtctcgatcgcctactcctcccag
agcgtggacggtcgcaccgcctccaccaacaaccagccgtcctgggtcggcgagggcttc
gagctgaaccccggcggctacgtcgagcgccgctacaagtcctgcatgatcgacggcaag
aagaccggcgacatgtgctgggaccaggacaacgccacgctgtcgctcggcgactcggcc
atggagctggtcaaggacgccacgaccaagcagtggcggcccaagcgcgacgacggcacc
aggatcgagtacctcaccggcgccaccaacggtgacaacaacggcgagtactggcgcgtc
accaccgccgacggctcccagtacaccttcggcctgaaccgcctgcccggctgggccagc
ggcaagccggtgacgaactcggtgcagacggtgccggtgttcggcaacaacagcggcgag
ccgtgccactccagcaccccggccaacgcctggtgccagcaggcctaccggtggaacctc
gactacgcggtcgacacccacggcaacgcgaccacgtactggtacgagctggagaagaac
tactacggccgcaacatgaagccggagctcggcaccccctacgtgcggggcgcgtacctc
acccgcatcgactacggctacctggggagcgagctgttcaccagggctccggcggccagg
gtcgtgttcgacgtggcggagcgctgcctgccgagcggcagcgtcacctgcgctcccgag
cagctcaagaaagagaccgccgcctcctggccggacgtgccgttcgaccagatctgcgat
tccggggtgaagtgcaccgaccgcctgtcgccgacgttcttctcgcgcaagaggctgacc
aaggtcacgacccagatccgcaccgccgccggccagtacgcgccggtggactcctgggcg
ctgacccaccagttccccgccacgggtgacggcatgagcccgtcgctctggctggcctcg
atccagcagaccggccacgtgggcggcacgatcacgctgccgaggaccacgttcatcggc
gtccagctgcccaaccgggtggacacgaacgagggccgcgccccgctggtcaagtggcgc
gtccaggccgtgaacagcgagagcggcggcgagctgcgcgtcaactacgcgcccgccgag
tgcgagcccggcaagctgccggccgccgacaagaacaccaagcgctgcttcccgcagcgc
tggtcgccgccgaacgaggccgaggtcaccgactggttccacaagtacgtcgtggcgcag
atcgtggaggtcgaccgggtcggcggcgcgccgaacaaggtcaccgactacgagtacctg
gacggcgccggctggcactacgccgacaacatcctcgtcaagcccgagcaccgcacctgg
gccgactggcgcgggtacggccgcgtacgggtgcgcgagggcgacggccaggacaccagg
cgcacgctcaccgagttccgctacttccgcggcctgcacggtgacaagcaggccgacggc
tccaagcgcagcgcccaggtcgaggactccgagggcgtcaagatggacgacctggaccag
ctgtccgggttcgagcgggaggagaccctgttcgacggtgacggcggcgcggtcctgacc
tcgaccgtcgaggagccgtggtcggtcaagacggccgagtccacgcagggcggcgtcacc
aaggccgcgtacatcgtgcagcccaagtccatggtcacccgcaccgcgctgggcggcggc
acgtggcggcgcaccggagaggagcgctcgtacgacgccaagggcctgctcacgcaggtc
gaggagcagggcgacctggccgacgacggcgacgaccagtgcacccgctacacctacgcc
cgcaacgacacgtcgtggatgctcgactacaccagcaggatccagaaggtcgcggccggc
tgcgacaccggcgtgtccacgctggccgccgacgaggtcatctccgacgagcgggtccag
tacgacgggaaggcgtacgggcaggcgccgagcaagggcgacgtgaccgcggtgcagcag
ctcgcgtccggcgacggcgcgacgatcaccgacagcacccacacgtacgacgtctacggc
cgggagaccagcgagaccgacgccatgggcaccaggtcgaccatggcgtacacgccggcc
acgggcgccccggccaccgaggtcacggagacgaaccagctcggccacgtcgagaagatc
attctcgagcccgcctggggagagccgatcgccgagatcgacgccaacggcaagcgcgtc
gacatggagcacgacgcgctaggccgcctcgtgaaggtctggcagaacgaccgcagcaag
gcggccggccagtcgccgaacaccgagtacgcctacaccgtccgcaacgacggccccagc
gtggtgaccaccaggacgctgcgcccggacggcggctacaccaccagctacgagctgtac
gacgggctgatgcgcgagcgccagacccaggagccggcgcccgtcgacgaccagacgcag
gacccggccctgcgcgacggccgcacgatcaccgacaccctctacaactccctgggcgag
aaggccaggtccaacaccggctacttcgccaccggggagcccgcgaccgagctgttcgcc
gtgtcggacaccgacgtgccgaaccagatcgtgtcgaccttcgacggcgccggtgacgtc
aacgcccagatcctcaaggccaagggcgtggagcagttccgggtcagcgtcaagcaggag
ggcgacagggtccacgtgacgccgccgcccggcgggaccgcgacgacccgcatcggcgac
gccgacgaccgcctcgtcgagctgcgccagtacaagggcgccaccccgaccggcgagtac
gagtccaccaagtacacctacgaccacgccggacggctgtccacggtgaccgacccggcg
ggcaacgtctggcgccaccactacgacgtgcgcggccgggagatcaggaccgaggacccg
gacaagggcgtcaccaccttcacctacaacgacgccgacgaggtggtcagcgtcagcgac
gcccgcggcaagaccctctggtactcctacgacgagctgggccgcaagaaggagatgcgc
gagggctcggcgaccggcccgctgctcgccgagtggaagtacgacgcgctggccaagggc
cacatgaacgccggcatccgctacctgggcgggcaggcgtacaaggcggagatcaacgcc
atcgacaccgcctaccgcccgctgcgcgagaccgtcaccatcccgccgcgcgagggcagg
ctggcgggctcgtacgtgctcaacacccgctacacgctggacggcgacgtccagtccgtc
agcttccccgccgccggggggctggaggacgagtcggtcgtctactcctacgacgcgctg
ggccagccgaccaaggtcaccggcctgtcgccgtacgtcagcgccacccgctactccaag
atgggggagacgctccagtacgagctgggctccggcagcaggaagacctggctcacctac
acccacgacgaggccacccgcaggctgaccgggatgcgcctcgaccgggcgggcgccgcg
tccaccgacctcgacctgcactacacctacgaccccgcgggcaacatcaccaagatcgcg
gaggaggccggcggccaggacacgcagtgcttcacgtacgaccatctgcgccgcatgacc
tcggcgtggacggccacggacgactgcgcgagcggtgcccccgagtccggcacgatcggc
ggcgtggccccgtacgcggtgagctacgactacgacgtcaccggcaaccggatcaaggag
accaggcacgcatggggcggcgcgccggagaccgtccgcacctccacctacccggaggcc
ggcggcaagcagccgcacgcgctgcagagcgtcgggcaggacctgttcgagtacgacgcg
gccggcaacaccaccaggcgcaaggtcggtgcctccgaccagaccctggtctgggacgcc
gagggcaacctggagtcggtcacggaggcgggcaggacgacgtcgttcgtgtacgacgcg
gatggcgagcggctgatccgcaagacgcccgacgacgccacgctctacatcgacgacatg
gagctgcgcttcgacttcgccaaggacaaggtcgagcagacccgctactacacgatcaac
gacaagcccgtcgcggtgcggacgccggacaaccaggtctacttcatggccaacgaccac
cagggcaccgcgcaggcggcggtgaacgccgccaacggcgagctggccgtacgcaggacg
accccgttcggtgaggaccggggctcgccaccaccgtggtggccgggccagcgtgggttc
gtcggcggcacgaaggacacgacgaccgggctcgtccacctcggggcccgcgagtacgac
cccaagaacggccggttcatatcggtcgaccccgtcatcgacgagcaggacccgcagcag
ctcaacgcctacgcctacgcgaacaacagccccgtctccatgagcgaccccgacggccag
ctgttctggatcgtcgcggccgtcgtggtcagggtcgccgcgtccgtgatcgcgaggcgg
ctcgcggcggcggcggccaggcgggcggcgctcgccgcggccagggcggcggccaggcgc
gcggccatcgcggcggccaaacgccgggcggcggcactggccaggaagaaggcgcttgag
gcggccaagaagagggccgccgagaaggccaagaaggcgaaggaggcgctcaaggcccgc
cgggccgcgatgaaggcgagaagggacgccaggaggaaggccgccgaggcggcggcgaag
cggcgcgccgcgctgaaggccagggcgcgcaatcaccgggccggccgggtccccaggggc
gtccagcaggcgcggtcgcgtccggcacaccggccgaccagccacaaggcggcacagcgc
cagtcgccgccgaaggtcgccaggcagccggcccagccacagccgagccacatctggcgc
aatgacgggaccaggcagccgacgcagtccatctccgtctaccgcaacggcgagatgtac
cccgacgggccgcctcctcccggtctccggccgggcggctccggccagggccagaagcag
atcttccggcccgagaaggtcgagccggagaacacgaggacgggcacgatcgccgagacc
ggcgcccgcgtgacccgctggatcgaccagagcggcctggacgacttcttcggattcttc
ttctag
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