Nonomuraea phyllanthi: GBF35_10805
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Entry
GBF35_10805 CDS
T06257
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
now
Nonomuraea phyllanthi
Brite
KEGG Orthology (KO) [BR:
now00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
now03009
]
GBF35_10805 (rimO)
Enzymes [BR:
now01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
GBF35_10805 (rimO)
Ribosome biogenesis [BR:
now03009
]
Prokaryotic type
ribosomal protein modification factors
GBF35_10805 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
CdrL_M
Motif
Other DBs
NCBI-ProteinID:
QFY07109
LinkDB
All DBs
Position
2239720..2241129
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AA seq
469 aa
AA seq
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MSSRRTASLITLGCARNEVDSEELAARLEAAGWQLGDDDPDVVVVNTCGFIDSAKKDSID
TLLAAADSGAKVVAAGCMAERYGNELAEALPEASAVISFDDYAEIGGRLDDVLAGRPLKP
HTPRDRRTLLPISPVDRASAPKANIPGHGDLPDGLAPASGPRVLRKRLDESPVASLKLAS
GCDRRCTFCAIPAFRGSYVSRRPDELLAEADWLAHRGVRELVLVSENSTSYGKDLGDLRA
LEQLLPRLAAVEGIDRVRVSYLQPAELRPGLIDVLTGTDGIAPYFDLSFQHASGTVLRRM
RRFGDPERFLGLLGSIRERAPEAGVRSNFIVGFPGETEEEFGELVGFLEEARLDVIGVFG
YSDEDGTEAAGLPGKLEQEVIDERVRVLTELAEELTAQRAEERMGTEVDVLIEDDLGDGG
YEGRAAHQGPEVDGSVTVQGIGLVRGQIVRAVVVDAEGVDLIARIKAGP
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcccgccgaaccgcatcgctgatcactctgggctgcgcacgtaacgaggtcgac
tccgaggagctggccgcgcgactcgaggctgccggctggcagctgggcgacgacgacccc
gacgtcgtcgtcgtcaacacgtgtggcttcatcgactcggccaagaaagactccatcgac
acgctgctggccgccgccgactccggcgcgaaggtggtcgccgcggggtgcatggccgag
cgctacggcaacgagctggccgaggcgctgcccgaggccagcgcggtcatctccttcgac
gactacgccgagatcggcggccgcctcgacgacgtgctcgccgggcggccgctcaagccc
cacacgccacgcgaccgccgcaccttgctccccatctcgccggtggatcgtgccagcgcc
cccaaggccaacatccccggccacggcgacctgcccgatggcctcgcgcccgcgagcggg
ccgcgcgtgctgcgcaaacggctcgacgagagcccggtggcctcgctcaagctggcctcc
ggctgcgacaggcgctgcacgttctgcgcgatcccggccttccgcggctcctacgtctcg
cgccggcccgacgagctgctggccgaggccgactggctggcccaccgaggggtgcgcgag
ctcgtcctggtcagcgagaactccacgtcctacggcaaggatctgggcgacctgcgggcg
ctggagcagctgctgccccggctcgcggccgtcgagggcatcgaccgggtgcgggtcagc
tacctccagccggccgagctgcgccccgggctgatcgacgtgctcaccggcaccgacggc
atcgccccctacttcgacctgtccttccagcacgccagcggcacggtgctgcgccggatg
cgccgcttcggcgaccccgagcgcttcctcgggctgctggggagcatccgcgagcgcgct
cccgaggccggcgtgcgctccaacttcatcgtgggcttcccgggagagaccgaggaggag
ttcggcgagctggtcggcttcctggaggaggccaggctcgacgtgatcggcgtgttcggc
tactccgacgaggacggcacggaggccgccgggctgccgggcaagctggagcaggaggtc
atcgacgagcgcgtgcgcgtgctcaccgagctggccgaggagctgaccgcccagcgcgcg
gaggagcgcatgggcaccgaggtcgacgtgctgatcgaggacgacctgggcgacggcggc
tacgaaggccgggccgcgcaccagggccccgaggtcgacggctccgtcacggtgcagggc
atcggcctggtcagggggcagatcgtgcgcgctgtcgtggtcgacgccgaaggggtcgat
ctgatcgcgcgcatcaaggccggcccatga
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