KEGG   Nonomuraea phyllanthi: GBF35_15890
Entry
GBF35_15890       CDS       T06257                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
now  Nonomuraea phyllanthi
Brite
KEGG Orthology (KO) [BR:now00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:now03400]
    GBF35_15890
Enzymes [BR:now01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     GBF35_15890
    5.6.2.6  RNA 3'-5' helicase
     GBF35_15890
DNA repair and recombination proteins [BR:now03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    GBF35_15890
SSDB
Motif
Pfam: DEAD Helicase_C ResIII Cas3-like_C_2
Other DBs
NCBI-ProteinID: QFY07961
LinkDB
Position
3475932..3478319
AA seq 795 aa
MTTSPPSASDAFDRLHPKVQQWIWQQNWRELREAQEASVAPILAGDRDVLIAAATASGKT
EAAFLPICSVLTEQPDTGGFAAVYISPLKALINDQYGRLDQLCDHLGITVSRWHGDVAAS
SKSKLLDRPRGILLITPESLEAMFVLRGWKIRDLMAGTRYLVIDELHSFIGTERGAQLQS
LMHRLDLAARRRIPRVGLSATLGDMGKAADYLRPRAGDDVTVIVSSSDAQELRLQIRGYV
QTAPTLDARARAAHEALGEEVAADDVATGDRLAIADHLFTTLRGSHNLVFAGSRAAVEDY
TDLLNRRCEDARVPEEFVPHHGNLSKDIREHAEARLKDHTRPATAVCTSTLEMGIDIGSV
TSIAQLGAPPSVAALRQRLGRSGRRGGPAILRLYVSEPEATPAIHPADELRAQLVQSIAT
IELLLQRWYEPPSAEALHLSTLTQQLLSLIAQHGGITPADAYRTLCGQGPFRAVDSPTFA
TLLRDLAAADLIRQENDGLLLPAETGERLINHHTFYAAFAAPTEYRIVTEGRTLGSLPIE
QPLPEGSLIIFAGRRWRIQAIDTHAKLIEVTRASGGRPPRFTSAGPLVHDRIRTTMRRLY
EDTTVPAYLDATAQSLLAEGRAAYRRLGLHDTPLVGYGNDTLLFPFHGDAIMTTLGLALH
AYGVDVVRYGAALLISDTSPQAAAGLLADLAVEGVPDALALAALIPDKRVDKYDDVIGEE
LLTRSYARRLDVTETQQSITALAATTDRTRAVNLDTPKVAAPPRRHRIGSLPYAVVDVEA
TCLDTRKARITEIAI
NT seq 2388 nt   +upstreamnt  +downstreamnt
atgacgacctcgcctccttccgcctctgacgcctttgaccgcctgcaccccaaggtccag
cagtggatctggcagcagaactggcgcgaactacgcgaggcccaggaagcctccgtcgcg
ccgatcctcgcgggcgaccgtgacgtgctcatcgccgccgcaaccgcctccggcaagacc
gaagccgcgttcctgccgatctgctcggttctgaccgagcagccggacaccggagggttt
gccgccgtctacatcagcccgctcaaggccctcatcaacgaccagtacggccgcctcgat
cagctctgcgaccatctgggcatcaccgtttcccgctggcacggcgacgtcgccgcctca
tccaagagcaagctgctcgaccgtccccggggcattctgctgatcacgccggagtcgctg
gaggcgatgttcgtcctgcgcggctggaagatccgcgacctgatggccggcacccgctac
ctcgtcatcgacgagctgcactcctttatcggcaccgaacgcggcgcccagttgcagtcc
ctcatgcaccgcctcgacctggcggcccgccgccgcatcccccgcgtcggtctgtcggcg
accctcggtgacatgggcaaagccgccgactacctgcgccctcgggccggcgacgacgtc
accgtgatcgtctccagtagcgacgcgcaagagctccgcctgcagatccgcggttacgtc
cagaccgcgcccaccctcgacgcgcgcgcccgcgccgcccacgaagccctcggcgaggag
gtggccgccgacgacgtggccaccggcgaccggctcgccatcgccgaccacctgttcacc
acgctgcgcggctcgcacaacctcgtcttcgcgggctcccgcgccgccgtcgaggactac
accgacctgctcaaccgccgctgcgaggacgcccgcgtaccggaggagttcgtcccgcac
cacggcaacctgtccaaggacatccgcgaacacgccgaagcccgcctcaaggaccacacc
cgcccggccaccgccgtctgcacctccaccctggagatgggcatcgacatcggctccgtc
acctccatcgcgcagctcggcgccccacccagcgtggccgccctgcggcaacgcctcggc
cgctccggacgcagaggcggacccgccatcctgcgcctgtacgtcagcgaacccgaagcc
accccggccatccacccggccgacgaactacgcgcccaactcgtgcagtccatcgccacc
atcgagctgctcctgcaacgctggtacgagcccccgtccgccgaagccctgcacctgtcc
accctcacccagcagctcctgtccctcatcgcccagcacggcggcatcacccccgccgac
gcctaccgcaccctctgcgggcaaggccccttccgcgccgtcgacagccccaccttcgcc
accctgctgcgcgacctcgccgccgccgacctcatccgccaggagaacgacgggctcctg
ctgcccgccgagacgggggagcggctgatcaaccaccacaccttctacgcagccttcgcc
gcacccaccgaataccgcatcgtcaccgagggccgcacgctcggcagcctgcccatcgaa
caaccgctcccggaaggcagcctgatcatcttcgccggccgccgctggcgcatccaggcc
atcgacacccacgccaagctcatcgaggtcacccgcgcctccggcggccgcccgccgcgc
ttcaccagcgccggcccactcgtccacgaccgcatccgcaccaccatgcgacgcctgtac
gaggacaccacggtcccggcctacctggacgccaccgcccagagcctgctcgccgaaggc
cgcgccgcctaccgccgcctcggcctgcacgacaccccgctcgtcggctacggcaacgac
accctgctgttccccttccacggcgacgccatcatgaccaccctcggcctggccctgcac
gcctacggcgtcgacgtcgtccgctacggagccgcgctgctgatcagcgacacctccccg
caagccgccgcaggcctcctggccgacctggccgtagaaggcgtgcccgacgccctcgcc
ctggccgcactgatccccgacaaacgcgtcgacaagtacgacgacgtcatcggcgaggaa
ctcctcacccgctcctacgcccgccgcctcgacgtcaccgagacccagcagtccatcacc
gctctcgccgccaccactgaccgcacccgagcggtcaaccttgacacgcccaaggttgcc
gcaccgccgcgccggcaccgcatcggctcgctaccgtacgccgtcgtggacgtcgaagcc
acctgtctcgacacccgcaaggcccgcatcaccgaaatcgcgatctga

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