Nonomuraea phyllanthi: GBF35_18450
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Entry
GBF35_18450 CDS
T06257
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
now
Nonomuraea phyllanthi
Pathway
now03030
DNA replication
now03430
Mismatch repair
now03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
now00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GBF35_18450 (dnaE)
03430 Mismatch repair
GBF35_18450 (dnaE)
03440 Homologous recombination
GBF35_18450 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
now03032
]
GBF35_18450 (dnaE)
03400 DNA repair and recombination proteins [BR:
now03400
]
GBF35_18450 (dnaE)
Enzymes [BR:
now01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GBF35_18450 (dnaE)
DNA replication proteins [BR:
now03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GBF35_18450 (dnaE)
DNA repair and recombination proteins [BR:
now03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GBF35_18450 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
MCM10_OB
Motif
Other DBs
NCBI-ProteinID:
QFY08390
LinkDB
All DBs
Position
4027600..4031127
Genome browser
AA seq
1175 aa
AA seq
DB search
MPSGESFVHLHVHTEYSMLDGAARLRQMFTKVGELGMPAIAITDHGNMHGAYDFYRQATA
AGVKPVIGIEAYVAPDLRHNKKPVLWGEPHQRRDDVSAGGHYTHMTIWARNKTGLHNLMR
LSSRAYTEGFVRKWPRMDAELLAEHADGLMATTGCPSGEVQTRLRLGQYDEALKAAAKYQ
EIFGKDDFYLEIMDHGLDIERRVRDGLVAISRELGIPPLVTNDSHYTYESDAASHDALLC
IQTGKQLSDPDRFRFDGSGYYIKTADEMRAVDSSGLWAEGCRNTLLVAEKVDPAGFFEFK
NLMPTYPIPDGMTESEFFRKTVWEGMDRRWPEGYDEQHRKQAEYEIGIIEQMGFPSYFLV
VADFIMWAKQNGIPVGPGRGSAAGSLVAYAMGITDLDPITHGLIFERFLNPERVSMPDVD
IDFDERRRGDVIRYVTEKWGADKVAMIATFGTIKAKAAIKDAGRVLGYPYALGDRVSKAF
PPAVMGKDIPLAGIFDKDHPRYNEAGELRRLYEEDADVKATMDLGRGLEGLIRQTGVHAA
GVIMSAEVLTDHVPIMRRDSDGAIITQFDYPTCETLGLLKMDFLGLRNLTIMDDCLKMIE
ATTGERVDLLSLPLDDRKSYELLAKGDTLGVFQLDGGGMRSLLRLMRPDNFEDISAALAL
YRPGPMGANSHTNYALRKNGQQEITPIHPSLAEPLKDILDTTYGLIIYQEQVMAIAQKVA
GFTLGAADLLRRAMGKKKKAELDKQYAGFEQGMLDRGYPPEAVKALWDILLPFSDYAFNK
AHTAAYGLIAYWTAYLKANHPAAYMAALLSSVKDDKDKSALYLNECRRMGIKVFPPDVND
SDFDFTPRGTDIRFGLSAVRNVGGNVVAGILKARKEKGRFGDFKDFLRKVPAVVCNKRVI
ESLIKAGAFDSLGHVRKGLVMVHEQAVDAIIDIKRNEAIGQDSLFGAIDGGEDQTFDVQI
PLGEWDKNTLLQFEREMLGLYVSDHPLFGVEHILAAGADCSIAAVQDESRPDGQVVTVGG
ILSGVQRKVTKKGDTWVLTQLEDLAGSIEVMIFPSAYQLCSTILAEDAIVFVKGRVDKRE
DVAKIIAMEVTAPDLTQEAGGPLLVSLPLTRCTPPVVARLKEILRTHPGTSEVHLQVHNG
PRTTVMRVGDRLRVTPSPALMGDLKQLLGPACLGA
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atgccgtccggcgagtcgttcgtccacctgcacgtgcacaccgaatactcgatgctggac
ggcgcggcccgcctcaggcagatgttcacgaaggtcggcgagctgggcatgccggcgatc
gcgatcaccgaccacggcaacatgcacggcgcgtacgacttctacaggcaggccacggcc
gccggcgtcaagccggtcatcggcatcgaggcctatgtcgcgccggacctgcgccacaac
aagaagccggtgctctggggcgagccgcaccagaggagggacgacgtctcggcgggcggc
cactacacccatatgacgatctgggcgcgtaacaagacgggcctgcacaacctgatgcgc
ctgtcctcgcgcgcctacaccgagggtttcgtccgcaaatggccgcgaatggacgccgag
ctcctggccgagcacgccgacggcctgatggccaccaccggctgcccgtcgggcgaggtg
cagacccggctgcggctcggccagtacgacgaggcgctcaaggccgccgcgaaataccag
gagatcttcggcaaggacgacttctacctggagatcatggaccacggcctcgacatcgag
cgccgcgtccgcgacgggctggtcgcgatcagcagggagctcggcatcccgccgctggtc
accaacgactcccactacacctacgagtccgacgccgcctcccacgacgccctgctgtgc
atccagaccggcaagcagctgtccgaccccgaccgcttccgcttcgacggcagcggctac
tacatcaagaccgccgacgagatgcgcgcggtcgactcctccggcctgtgggccgagggc
tgccgcaacaccctgctggtggcggagaaggtcgacccggccgggttcttcgagttcaag
aacctcatgccgacctaccccatccccgacggcatgacggagagcgagttcttccgcaag
accgtctgggagggcatggaccggcgctggccggagggctacgacgagcagcacaggaag
caggccgagtacgagatcgggatcatcgagcagatgggcttcccgagctacttcctcgtg
gtcgccgacttcatcatgtgggccaagcagaacggcatcccggtcggccccgggcgcggc
tcggcggcggggtcgctggtggcgtacgcgatgggcatcaccgacctcgacccgatcacg
cacggcctgatcttcgagcggttcctcaaccccgagcgcgtctccatgcccgacgtcgac
atcgacttcgacgagcgcaggcgcggtgacgtgatccgctacgtgaccgagaagtggggc
gccgacaaggtcgccatgatcgccacgttcggcaccatcaaggcgaaggccgccatcaag
gacgccggccgcgtcctgggctacccctacgcgctcggcgaccgggtctccaaggcgttc
ccgcccgccgtcatgggcaaggacatcccgctcgccggcatcttcgacaaggaccacccg
cgctacaacgaggcgggcgagctgcgcaggctctacgaggaggacgccgacgtcaaggcg
acgatggacctcggcaggggcctggagggcctgatcaggcagaccggcgtgcacgccgcc
ggcgtgatcatgtcggccgaggtgctgaccgaccacgtcccgatcatgcggcgcgactcc
gacggcgccatcatcacgcagttcgactacccgacctgcgagacgctcggcctgctcaag
atggacttcctgggcctgcgcaacctcaccatcatggacgactgcctcaagatgatcgag
gcgaccacgggggagagggtcgacctgctctcgctgccgctcgacgaccggaagtcgtac
gagctgctggccaagggcgacacgctgggcgtgttccagctcgacggcggcggcatgcgc
tcgctgctgcgcctcatgcgccccgacaacttcgaggacatctccgcagccctcgcgctc
taccgtcccggcccgatgggcgccaactcccacaccaactacgcgctgcgcaagaacggc
cagcaggagatcacgccgatccacccgtcgctggcggagccgctcaaggacatcctcgac
acgacctacggcctgatcatctaccaggagcaggtcatggccatcgcgcagaaggtggcc
ggcttcaccctcggcgccgccgacctgctgcgccgcgcgatgggcaagaagaagaaggcc
gagctggacaagcagtacgccggcttcgagcagggcatgctcgacaggggctacccgccc
gaggccgtcaaggcgctgtgggacatcctgctgccgttctccgactacgccttcaacaag
gcccacaccgccgcctacggcctcatcgcctactggaccgcctacctcaaggccaaccac
ccggccgcctacatggccgcgctgctgtccagcgtcaaggacgacaaggacaagtcggcc
ctctacctcaacgagtgccgccgcatgggcatcaaggtgttcccgccggacgtcaacgac
tccgacttcgacttcacgccgcgcggcaccgacatccgcttcggcctgtcggccgtccgc
aacgtcggcggcaacgtcgtcgccggcatcctcaaggcacgcaaggagaagggccgcttc
ggcgacttcaaggacttcctgcgcaaggtgcccgccgtcgtctgcaacaagcgcgtgatc
gagtcgctgatcaaggcgggcgcgttcgactccctcggccacgtccgcaagggcctggtg
atggtgcacgagcaggccgtggacgcgatcatcgacatcaagcggaacgaggccatcggc
caggactccctgttcggggcgatcgacggcggcgaggaccagaccttcgacgtgcagatc
ccgctgggggagtgggacaagaacacgctgctgcagttcgagcgggagatgctcggcctc
tacgtgtccgaccacccgctgttcggcgtcgagcacatcctggcggcgggcgccgactgc
tcgatcgcggccgtccaggacgagagccggcccgacgggcaggtggtgaccgtgggcggc
atcctgagcggggtgcagcgcaaggtcaccaagaagggcgacacctgggtgctgacccag
ctggaggacctcgcgggctcgatcgaggtgatgatcttcccgtcggcctaccagctgtgc
tcgacgatcctggccgaggacgcgatcgtgttcgtcaaggggcgcgtcgacaagcgggag
gacgtggcgaagatcatcgccatggaggtgacggcgcccgacctgacgcaggaggcgggc
gggccgctgctggtgagcctgccgctgacccgctgcacgccgccggtggtggcgcggctc
aaggagatcctccgcacgcatccgggcacctcggaggtgcacctgcaggtccacaacggg
ccgaggacgacggtcatgcgggtgggcgaccggctgcgcgtcacgccgtccccggcgctg
atgggcgacctgaaacagctcctcggccccgcctgcctcggcgcctga
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