Nonomuraea phyllanthi: GBF35_31595
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Entry
GBF35_31595 CDS
T06257
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
now
Nonomuraea phyllanthi
Brite
KEGG Orthology (KO) [BR:
now00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
GBF35_31595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
now03021
]
GBF35_31595
Transcription machinery [BR:
now03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GBF35_31595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r1_2
Sigma70_r4
Motif
Other DBs
NCBI-ProteinID:
QFY10551
LinkDB
All DBs
Position
complement(6787925..6788920)
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AA seq
331 aa
AA seq
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MSKASEESVLSQAAEVLELDDNVADSGAAVGADSVKAYLKEIGRVPLLTAEQEIELAKRI
EAGLFARERLDTEPGLPPELRADLEWIADDGLRAKRRMLEANLRLVVSIAKRYTGRGMLF
LDLIQEGNLGLIRTIEKFDYRLGYKFSTYATWWIKQAITRAMADQARTIRIPVHMVELIN
KVARVERRLQSDLGREPTPEEIAQETELDPERVVEIQGYGREPISLSTPLGEEGDSEFGD
LIEDTEAVSPADAVSFTLLQQQLHALLDQLSEREAGVISMRYGLADGQPRTLDEIGRIYG
VTRERIRQIEAKTMSKLRHPSRSLALRDYLS
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
gtgtccaaagcgagcgaggagagtgttttgtcccaagcagcagaggttctcgaactcgac
gacaatgtggccgacagcggcgcggccgtcggcgccgactcggtcaaggcatatctgaag
gagatcgggcgggtgccgctgctcaccgccgagcaggagatcgagctggccaaacgcatc
gaggccgggctgttcgccagggagcggctcgacaccgagccggggttgccgcccgagctg
cgcgccgatctggagtggatcgccgatgacggcctacgcgccaaacgccgcatgctggag
gccaacctgcggctggtggtctccatcgccaagcgctacaccggccgcggcatgctcttc
ttggacctgatccaggagggcaacctgggcctgatccggacgatcgagaagttcgactac
cggctcggctacaagttctcgacgtacgccacgtggtggatcaagcaggccatcaccagg
gccatggccgaccaggcccgcacgatccgcatccccgtccacatggtggagctgatcaac
aaggtggcgcgggtggagcggcgcctgcagagcgacctcggccgcgagcccacgcccgag
gagatcgcccaggagaccgagctcgaccccgagcgggtcgtcgagatccaggggtacggc
cgcgagcccatctcgctgagcacgccgctgggcgaggagggcgacagcgagttcggcgac
ctcatcgaggacaccgaggccgtctcaccggccgacgcggtctcgttcacgctgctccag
cagcagctgcacgccctgctcgaccagctgtccgagcgcgaggccggcgtgatcagcatg
cgttacggcctggccgacggccagccgaggacgctcgacgagatcggccgcatctacggc
gtcacccgcgagcgcatccgccagatcgaggccaagacgatgtccaagctgcgccacccg
tcccgctccctggcactgcgcgactacctgagctga
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