Nonomuraea phyllanthi: GBF35_40280
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Entry
GBF35_40280 CDS
T06257
Name
(GenBank) rhamnogalacturonan lyase
KO
K18197
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
now
Nonomuraea phyllanthi
Brite
KEGG Orthology (KO) [BR:
now00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
GBF35_40280
Enzymes [BR:
now01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
GBF35_40280
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Gene cluster
GFIT
Motif
Pfam:
RGL11_C
CBM_2
RGI_lyase
FG-GAP_3
FG-GAP
Motif
Other DBs
NCBI-ProteinID:
QFY11985
LinkDB
All DBs
Position
complement(8782826..8785015)
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AA seq
729 aa
AA seq
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MKRSNFAATAAALALATAGVITAQLPARAAVACEVDYTVSTQWPGGFTGSVTIHNVGDAI
DGWRLAWSFTAGQEITQAWNATATQNGSSVTAEDAGYNAAIPEGGSATFGFNAGWNNSSN
PHPDSFTLNGVACTGEPGDPDDPGDPGEPTPTVTPTSVPEGAKQVEDLDRGLISVRSGSG
NLVLWRLLGTESRDTSFTVYRGGTRIASVTDSTNYLDAGASGDASYTVRAVSGGSEGPAS
EASLRFANGYLDVPISAPGGSYSANDASVGDLDGDGRLDLVLKWDPANSKDNSQSGVTDP
VYVDGLRLDGTRLWRVNLGRNIRAGQHYTQFQVYDYDGDGRAEVAMKTADGTVDGRGTVI
GSASADYRNSDGYVLSGPEYLTMFDGRSGAALSTVNYDPPRGNVSSWGDGYGNRVDRFLA
ATAYLDGQRPSLIMARGYYTRSVIAAWDFRNGSLTKRWTFDSNANTSYAGQGNHNLSVAD
VDADGRDEIVYGSMAVNDNGAPLWNNRNGHGDAMHVGDLDPSRPGLEEFKVDEDSSKPGS
WFADARTGQVLWSTASGGDNGRGVSGDIWAGSRGAESWSARDGSLRSPSGANVGRKPSSM
NFLAWWDADAVRELLDGTHIDKYGTGGDSRLLTGSDVHSNNGTKAVPSLSGDVLGDWREE
VIWPTSDNRALRIYATPVRTGIKIHTLLHDPQYRVALAWQNTAYNQPPHPSFFIGDGMST
PPQPDIYVR
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgttcaaatttcgcggcgacggccgcagcgctcgccctggccaccgccggggtg
atcactgcccagttaccggccagggccgccgtcgcctgcgaggtcgactacaccgtctcc
acccagtggcccggcggcttcaccggcagcgtgaccatccacaacgtgggtgacgcgatc
gacggctggcgcctggcctggtccttcaccgccggccaggagatcacccaggcgtggaac
gccaccgccacgcagaacggctcgtccgtcaccgccgaggacgcgggctacaacgccgcg
atcccggagggcggcagcgcgacgttcggcttcaacgccgggtggaacaactccagcaac
ccgcatccggactccttcaccctcaacggagtggcctgcaccggcgagccgggcgacccc
gacgacccgggcgaccccggcgagccgaccccgacggtcaccccgacctcggtgcccgag
ggcgccaagcaggtcgaggatctcgaccgcgggttgatcagtgtgcggtcggggtcgggg
aatctggtgttgtggcggttgctgggcaccgagtcgcgtgacacgtcgttcactgtgtat
cggggtggcactcgcatcgcgtcggtgacggattcgaccaattacctggatgcgggggcg
tcgggggatgcctcgtacacggtgcgggcggtcagtggcgggtcggaggggccggcgtcg
gaggcgtcgctgcggttcgcgaacgggtatctggatgtgccgatcagtgcgccgggcggg
tcctacagtgccaacgacgcgtcggtgggggatctggacggtgatggccggctggatctg
gtgctgaagtgggatccggccaattccaaggacaattcgcagtcgggggtgaccgatccg
gtctacgtggatgggctgcggttggacggtacccggttgtggcgtgtcaatctgggccgc
aacatccgggcggggcagcattacacgcagttccaggtgtatgactacgacggggacggc
cgggccgaggtggcgatgaagaccgccgatgggacggtggacgggcggggtacggtgatc
ggcagcgcgagcgctgattaccgtaactccgacggttatgttctgtcggggccggagtat
ctgacgatgttcgacgggcgcagcggtgctgcgttgtcgacggtgaactacgatccgccg
cggggcaatgtgtcctcgtggggggatggttacggtaaccgggtggatcggttcctggcc
gcgaccgcgtatctggatgggcagcgtccgagtctgatcatggcgcgggggtattacacc
cggtcggtgatcgcggcgtgggatttccggaacgggtcgttgaccaagcggtggacgttc
gactccaacgcgaacacgtcttatgcggggcagggcaatcacaacctgtcggtggccgat
gtggatgccgatgggcgggacgagatcgtctacgggtcgatggcggtcaacgacaacggt
gctccgttgtggaacaaccgcaacggtcacggcgatgcgatgcacgtcggcgacctggat
ccgtcccggccggggctggaggagttcaaggtcgatgaggacagcagcaagccgggctcc
tggttcgccgacgcgcggacgggtcaggtgttgtggtcgaccgcttcgggtggcgacaac
ggccgcggggtgtcgggggacatctgggcgggcagccggggcgcggagtcgtggtcggcg
cgggacgggtcgctgcgcagtcccagtggcgcgaatgtggggcgcaagccgtcctcgatg
aacttcctggcctggtgggacgccgatgcggtgcgggagttgctggatggcacgcatatc
gacaagtacggcaccggtggcgacagccggctgctgaccgggagtgatgtgcattccaac
aacgggaccaaggcggttccgtcgctgtcgggcgacgttctgggggactggcgtgaggag
gtgatctggcccacctccgacaaccgggcgttgcggatctacgccacgccggtccgtacc
ggcatcaagattcacacgttgctgcacgacccgcagtatcgcgtggctctggcctggcag
aacaccgcctacaaccagccgccgcatcccagcttcttcatcggcgacggcatgagcacc
ccgccccagcccgacatctacgtccgctga
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