Nitrosopumilus oxyclinae: C5F49_00055
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Entry
C5F49_00055 CDS
T06689
Name
(GenBank) AAA family ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
nox
Nitrosopumilus oxyclinae
Pathway
nox04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
nox00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
C5F49_00055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nox03019
]
C5F49_00055
03009 Ribosome biogenesis [BR:
nox03009
]
C5F49_00055
04131 Membrane trafficking [BR:
nox04131
]
C5F49_00055
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nox04147
]
C5F49_00055
Messenger RNA biogenesis [BR:
nox03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
C5F49_00055
Ribosome biogenesis [BR:
nox03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
C5F49_00055
Membrane trafficking [BR:
nox04131
]
SNARE
SNARE associated proteins
Others
C5F49_00055
Autophagy
Aggrephagy
Other aggrephagy associated proteins
C5F49_00055
Exosome [BR:
nox04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
C5F49_00055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_16
RuvB_N
AAA_2
AAA_5
AAA_22
TIP49
AAA_14
CDC48_2
AAA_33
nSTAND3
Mg_chelatase
AAA_28
ABC_tran
RNA_helicase
AAA_18
IstB_IS21
NPHP3_N
AAA_7
AAA_lid_PRS2_C
AAA_24
Zeta_toxin
Sigma54_activat
AAA_3
Parvo_NS1
DUF815
NACHT
AAA_17
AAA_11
TsaE
AAA_30
bpMoxR
PhoH
ATPase
ORC-CDC6-like
ResIII
TniB
AAA_19
Viral_helicase1
CPT
Hydin_ADK
RPN13_C
Motif
Other DBs
NCBI-ProteinID:
QLH03889
UniProt:
A0A7D5M565
LinkDB
All DBs
Position
9909..12050
Genome browser
AA seq
713 aa
AA seq
DB search
MTEIILKVEESPQQHVGRGRAIVDPKIIEDQKWNTGQILELTHNKKTHVKLWPGSPEEYG
SGIIKIDGMTRQNIGAGIGDKISLRTVEAVNAEQIILSPTEKIAAEGLQEYMIYNYLNHV
FTTGDSVSLNTQMGGRVQFFVTSTKPSKPVLVTENTVFKLGAMTKAVDSSVPRITYDELG
GLKKEVQKIREMVELPMRHPELFDKIGVEAPKGVLLYGPPGTGKTLLAKAVAGETNAHFI
SLSGPEIMGKHYGESEERIREIFTQAEENAPSIIFIDEIDSIAPKRDEVSGELEKRIVSQ
LLTLMDGMKSRGKVVVIAATNRPDSIDPALRRPGRFDREIEIGIPDDEGRFDILSIHTRG
MPIDDKVDLKQISKTTHGFVGADLEILSKEAAMKALRRILPEVDYDEEKISSEILEKIQI
TSDDFRDALKEVSPSALREVQVQVPNVSWDDVGGLDELKEELKEAVEWPIKYKDAYDYVD
VEAPKGILLHGPPGTGKTMIAKALAKMTESNFISIKGPELLSKWVGESEKGVREIFRKAR
QAAPCIIFLDEVDALVPRRGSGGSDSHVTENVVSQILTEIDGLEELNNVLIIGATNRLDI
VDEALLRPGRFDRIIKVPNPDEKGRQHIFEIHTKKKPLDSDVKISEIVKLTDDFSGAEIA
AVTNRAAITALKRYVSGKSKNVKEIKITQQDLIDAVDKVRPQKKEAPIPQSIK
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgacggaaataattttaaaagttgaagaaagtccacaacaacatgttggaagaggtaga
gccatagttgatcctaaaattattgaggatcaaaaatggaatactgggcaaatactagaa
ctaacgcacaataaaaaaacacatgtaaaactttggccaggttcacctgaagaatatggt
tcaggtattatcaaaatagatggaatgactagacaaaatattggagctggaattggtgat
aaaatttcactaagaacagttgaagctgtaaatgctgaacaaattattttgtctcctact
gaaaagattgctgcagaaggattgcaagaatatatgatttacaattatcttaatcatgta
tttacaactggagattcagtatctctcaatacacagatgggtggaagagttcagtttttt
gtaacaagtacaaagccatcaaaacctgtgttagtaactgaaaatactgtattcaaactt
ggagcaatgactaaagcagttgattcttctgttccaagaataacatatgacgaactagga
ggactgaaaaaagaagttcaaaaaattcgtgaaatggtagaactaccaatgagacatcca
gaattatttgataaaataggcgtggaagcaccaaaaggcgtactcttgtatggtcctcca
ggtactggtaagacattattggcaaaggcagtagccggagaaacaaatgctcactttatc
tccctaagtggacctgaaataatgggcaaacattatggagagagtgaagaacgaattaga
gaaatctttactcaagctgaagaaaatgctcctagcataattttcattgatgagattgat
tcaatcgctccaaagagagatgaagtttctggcgaactagagaaaagaattgtttcacaa
ttactaactctaatggatggaatgaaatctagaggtaaggttgttgtaattgcagctact
aacagaccagattcaattgatcctgcacttagaagaccaggtagatttgatagggaaatt
gaaattggaattcctgatgatgaaggaagattcgatatactatcaattcatacgcgtgga
atgccaattgatgacaaagtagatttaaaacaaatctcaaaaactacacatggatttgta
ggagctgatttggaaatattatctaaagaagccgcaatgaaagctctacgtagaattcta
cccgaggttgactatgatgaagaaaaaatttcatcagagatacttgaaaagatccaaatc
acaagtgatgactttcgagatgcattaaaagaagtcagtcctagtgcacttagagaagtt
caagtccaagttccaaatgtaagttgggatgatgttggaggtttggatgaactaaaagaa
gaactcaaggaagccgttgaatggccaatcaaatacaaggatgcatatgattatgtagat
gtagaagcaccaaaaggaattctacttcatggccctcctggaactggtaagacaatgata
gcaaaggctcttgcaaaaatgacagagtctaattttatcagcatcaaaggtcctgaacta
ctctcgaaatgggtaggagaatctgaaaaaggcgtcagagaaatattcagaaaagcacga
caagctgctccatgtattattttcttagatgaagttgatgcacttgttccaagaagagga
agtggaggatctgattcacatgttacagaaaatgtagtgtctcaaatccttactgaaatt
gatggactagaagaactaaacaatgtgttgataattggagcaacaaaccgattagacatt
gttgatgaagcactactaagaccaggcagatttgatagaatcatcaaagttccaaatcct
gatgagaaaggaagacagcatatctttgagattcatacaaagaaaaagccacttgacagt
gatgtaaaaatctcagaaattgtaaagttgactgatgatttcagcggcgctgagattgca
gcagtcacaaacagagcagctattacagctttgaagagatatgtctctggcaagtcaaag
aacgtcaaggagatcaagattacacaacaagatctaattgatgctgtggataaggtaagg
cctcaaaagaaagaggcacctatacctcaatccataaaatag
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