KEGG   Nitrosopumilus oxyclinae: C5F49_00525
Entry
C5F49_00525       CDS       T06689                                 
Name
(GenBank) Lhr helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
nox  Nitrosopumilus oxyclinae
Brite
KEGG Orthology (KO) [BR:nox00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:nox03400]
    C5F49_00525
Enzymes [BR:nox01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     C5F49_00525
    5.6.2.6  RNA 3'-5' helicase
     C5F49_00525
DNA repair and recombination proteins [BR:nox03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    C5F49_00525
SSDB
Motif
Pfam: DEAD DEAD_assoc Helicase_C ResIII WH_Lhr Cas3-like_C_2 SNF2-rel_dom DEXQc_Suv3 Zn_ribbon_8 AAA_19
Other DBs
NCBI-ProteinID: QLH03975
UniProt: A0A7D5M1Z6
LinkDB
Position
97697..100438
AA seq 913 aa
MNDHDQIHQLNQLLNSLFGKFGFSKLTEIQKKASPIILQKKDCLVIAPTGSGKTECSVIP
IFSLVKNVKISGKIKTLYITPLRALNRDVFRRITKYANENQLTLEIRHGDTSQKDRKKIT
ENPPDILITTPETLVILLTQVKMLSALTDLEWIVIDEVHELLSSERGSQLSLSIERLEIN
SRYPLTKVGLSATVGNFEDAGKFLVGTKRKCEIIRDTSVRKYDVEVKYVDGTISDVAQKI
IDYVVELELDSPILLFTNTRGEAEFLASILKEKSSFPIELHHGSLSKQVREETELTLREG
KRGIVVCTSSLELGLDIGSIELVIHYGSPRQVSKFVQRIGRSKHNRDASAQGLIITNNSD
DEFETRAILDRIHEGSIEEQTIHEGSLDVLAHHLVGLSMQIGEVSIEQAFDLVTKAYPFR
NLKIEDLLDVINLLDSNYLIFFDRIKMTYWKKGGSFKYYFENLSTIPDILKFKVFDSVGK
KIIGSLDQRFVGDFGDSGNIFVLKGLQWRILNVDEKSFSVNVEPFRGGGITVPYWEGESI
PIDYKTARKVGSFRSKVKNGDITLTNKIIEKLTIDPIPDQNNIVIESNRSQGSIVIHSCM
GSKINSTISTILSSMLSTMLGSIVDSRSDGYRIVLSSTARISEKLFIEILEDDYNLQSVV
SASLTGTHNVNWRTWCVAKKFGVVGRGAVYERKSARFLYERYSKTALVHEALRELFHDKY
DLKNTEKILKKIKDDEIHVTWLEVDKFSKLAEPVLDHTAKYYASPANLDKGIIDLVIARL
EKTKHRLICARCGKWERVMQTFEVKDLMICPYCKARQITATYYSDYDLPKIIRKKHDGKK
LSTEEKHKFVRAWKVASLIENFGKTAITVISGYGVGADTAARILRNMVDEEHLFKQIYEA
ERQYVVTRGFWDS
NT seq 2742 nt   +upstreamnt  +downstreamnt
atgaacgatcacgatcaaatacaccagttgaatcaacttcttaattctttatttggaaaa
tttggtttttctaaactaactgaaattcaaaaaaaagcatcacccataatattacaaaaa
aaagattgtcttgtaattgcacctactggttctggtaaaacagaatgctcagtaattcca
atcttttcacttgtaaaaaatgtcaaaatatctggaaaaatcaaaactctatacatcact
ccgctaagagcattgaatcgtgatgtatttcgaagaattacaaaatatgcgaatgaaaat
caattaacacttgaaattcgtcatggtgatactagtcaaaaagatagaaaaaaaataact
gaaaatccacctgatattctaattacaactcctgaaactcttgttattcttttaacacaa
gtcaaaatgctctctgcattaactgatttagaatggattgtaatagatgaagtacatgaa
ttactatctagtgaaagaggatcgcaactatcactaagtattgaaagactagaaataaac
tcaagataccctcttacaaaagttggattatctgctactgtcggaaattttgaagacgca
ggaaagtttcttgttggcactaagcgaaaatgtgagatcattcgagatacttctgtgaga
aaatatgatgtagaagtaaaatatgttgatgggactatttcagatgttgctcaaaaaatt
attgattatgttgtagagttagaattagattctccaattcttctctttacaaatactaga
ggagaagctgaatttttagcatcaatcttaaaagaaaaatcatcttttccaattgaatta
caccatggttctctctcaaaacaagtaagagaagaaactgaactaactttacgtgaagga
aaacgtggaattgtagtatgcacatcttcattagaattgggtctagatattggatcaatt
gaattggtaattcattatggttctcctagacaagtgtctaaatttgttcaaagaattggt
agaagtaaacataatcgagatgcatcagcccagggattaattattacaaataattctgat
gatgaatttgaaacaagagctattcttgatcgtatacatgaaggttcaattgaagagcaa
acaattcatgaaggttctcttgatgttttagctcatcatttagttggattatcaatgcaa
attggtgaggtttcaatagagcaagcttttgatttagtaactaaagcatatccatttaga
aatttgaaaattgaagatttacttgatgtgataaatttacttgattcaaattatttaata
ttttttgatagaataaaaatgacttattggaaaaaaggcggctctttcaaatattatttt
gaaaatctctcaacaatacctgatattttgaaattcaaagtttttgatagtgttggaaaa
aaaattattggatctctagatcaaagatttgttggtgattttggtgattccggaaatatt
tttgtcttaaaaggtttacagtggagaattctcaatgttgatgaaaaatcattcagtgta
aatgttgagcctttcagagggggaggaattactgtgccatattgggaaggcgaaagtatt
ccgattgattataagactgcaagaaaagtaggatcttttcgtagcaaagttaagaatgga
gatattacattgacaaataaaataattgaaaaattaactattgatccaattccagatcaa
aataacattgtaattgaatctaatcgttctcaaggatcaatagttattcattcctgtatg
ggctcaaaaattaattccacaatatcaacaatactttcttcaatgctgtctacaatgttg
ggatcaatagttgactctcgttctgatggatatagaattgttttatcttctacagcaaga
atttcagaaaaactcttcatagaaattctagaagatgattataatttacaatctgttgtt
agtgcatctttaactggaacacataatgtaaattggcgaacttggtgtgttgcaaaaaaa
tttggagtcgttggtcgtggtgcagtatatgaaagaaaatctgccagatttttatatgaa
cgatattctaaaacagcacttgtacatgaagcgttacgtgaattatttcatgataaatat
gatcttaaaaacactgaaaaaattctaaaaaagatcaaagatgatgaaattcatgttact
tggttagaagttgataaattctcaaaattggctgaacctgttttagatcacactgcaaaa
tattatgcatctccagcaaatcttgataaaggaattattgatcttgttatagccagacta
gaaaaaactaaacatcgtttgatttgtgctcgttgtggaaaatgggaacgtgtaatgcaa
acctttgaggtaaaagatttgatgatttgtccttattgtaaggcaagacaaatcactgct
acatattattcagattatgatttacctaaaataattagaaaaaaacatgatggaaaaaaa
ctttctacagaagaaaaacacaagtttgttcgtgcctggaaagttgcctcattaattgaa
aattttggtaaaactgccattactgtaatatctggatatggtgtgggtgctgacactgct
gcaagaattttaagaaatatggttgatgaagaacatttgtttaaacaaatctatgaagca
gaaagacaatatgttgtgacgagaggtttttgggattcttaa

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