Nitrosopumilus oxyclinae: C5F49_02425
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Entry
C5F49_02425 CDS
T06689
Symbol
endA
Name
(GenBank) tRNA-intron lyase
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
nox
Nitrosopumilus oxyclinae
Brite
KEGG Orthology (KO) [BR:
nox00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nox03016
]
C5F49_02425 (endA)
Enzymes [BR:
nox01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
C5F49_02425 (endA)
Transfer RNA biogenesis [BR:
nox03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
C5F49_02425 (endA)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Motif
Other DBs
NCBI-ProteinID:
QLH04297
UniProt:
A0A7D5R2X1
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All DBs
Position
426251..426814
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AA seq
187 aa
AA seq
DB search
MDDTPLVHGELVSDQTCITQKNMIHELELKGFGEIEEKKLFLKSFETLYLLYAKRLILKK
NKKQINFDIFMNICQKTDSETLTKFLIYRDLRNRGYVVKDGFGFGSDFRVYERGHYGEKG
AKFLIFGLNEGQQEKMGNLQKKIEEITQMGKEPIIAVIERRGEVIYYKINKMDFAENKSR
LEEPFDL
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atggatgataccccattagttcatggagagttagtttcagatcaaacatgtatcacacaa
aagaacatgattcatgaattagaattaaaggggtttggagaaattgaagaaaaaaaatta
ttcctaaaatcatttgaaacactttacttgttgtatgcaaaaagactgattctaaaaaag
aacaaaaaacaaattaattttgatattttcatgaatatttgtcaaaaaactgattctgag
actcttacaaagtttttgatttatcgtgatcttaggaataggggctatgttgtaaaagat
ggatttggatttggttctgattttcgagtgtatgagaggggtcattatggtgaaaaaggt
gcaaaattcctaatctttggactcaatgagggtcaacaagaaaagatgggaaatctacaa
aaaaagattgaagaaattactcaaatgggaaaagaaccaatcattgcagtaatagaacgc
cgtggtgaagttatctactataaaatcaataaaatggattttgcagaaaacaaatcaaga
cttgaagaaccctttgatctctaa
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