Nitrosopumilus oxyclinae: C5F49_03250
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Entry
C5F49_03250 CDS
T06689
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
nox
Nitrosopumilus oxyclinae
Pathway
nox00470
D-Amino acid metabolism
nox01100
Metabolic pathways
nox01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
nox00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
C5F49_03250
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
C5F49_03250
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
nox01011
]
C5F49_03250
Enzymes [BR:
nox01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
C5F49_03250
Peptidoglycan biosynthesis and degradation proteins [BR:
nox01011
]
Precursor biosynthesis
Amino acid ligase
C5F49_03250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
ATP-grasp_4
ATP-grasp_3
Peptidase_M20
CPSase_L_D2
RimK
ATP-grasp
GARS_A
ATPgrasp_Ter
CRA
Motif
Other DBs
NCBI-ProteinID:
QLH04441
UniProt:
A0A7D5RAA9
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All DBs
Position
572340..574508
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AA seq
722 aa
AA seq
DB search
MKVALIYNENKIDPNDVINVFGMTTKEHYSSKAVERVAQSLEKGGHTVKVIEGDIHLNEE
LKEFMPKVVAGENPGMVFNMAYGIQGQNRYTHIPAMMEMLGIPYIGSGPAGHAIVQDKVM
TKIVLQKNKIPTPGFWVFRTPEDKHDDLIFPVIVKPKLESTSMGMEVVDNWDDLRAAVKV
QIEKFQQDILVEQFISGREFAVGLLGNKPNIEVLPIVEINLDHPDQIQTITDKKKKGGVE
KTCPAKLSKEKEAEMKQMCIDAFSALGLNDYTRVDFRMDKDENLYILELNSMASLGTGGS
FYHAGKTAGYTYESLVNKILDVAVIRYFGSTTQHNDEEVDLTQPLRVVARTYLRSHLQSL
KETLKDYVNLNTHVYNIENVNQLGTKLSKRLSHLGFSEQVYKQSDVGDFRYFKNHSDSHN
DVLFISHMDTHYGPNDLITYSETSDKIVGSGVAESKGGLVVMLGALHALRFSKRLKKIKC
GVLLTTDDSLGGRHSSNLIEEISKNSKYILGLKSGSVDGGIITTCYGRSDYEVRFTSTGD
EANSNIHGIIPVLAKKLAAIDKISKDEKNYRLSTTSVVAQGSHGHTPNYATISLTCSYKT
EKLGELLDSKIKSVMKKRESNSKKLDVAVNKIQTRHPVLEEPSDTKFYKLVEDLAKKHEI
KIKKHAQLLSSDISNVPVRLPALDGFGPLGNHYRTSKEYIIHDSLIERAALLASVVFKCA
AK
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttgctttaatttacaatgaaaataagatagatcctaatgacgtaatcaatgtc
tttggtatgactaccaaagaacactatagttcaaaagcagttgagagagttgcccaatcc
ttagaaaaaggcggacacactgtcaaggtaattgaaggtgatattcacttaaatgaagaa
ttaaaagaatttatgccaaaagtggttgcaggtgaaaatcctggcatggtctttaacatg
gcatatggtattcaaggtcagaacagatacactcacattcctgcaatgatggagatgctt
ggaattccatacatcggttctggtccagcaggtcatgccattgttcaagataaggtgatg
accaaaatagttttgcagaaaaataaaattcctactcctggattctgggtgtttagaact
cctgaagacaaacatgatgacttgatatttcctgtgattgtaaaaccaaaactagaatct
acttctatgggaatggaagttgtagataattgggatgacttgagagctgcagttaaagtt
caaattgaaaaattccaacaagatattttggtagaacaattcatttcaggaagagagttt
gctgtgggtttgttgggaaataaaccaaacatagaagttttaccaatcgttgaaattaat
cttgatcatcctgatcaaatacaaactattactgataaaaagaaaaaaggtggagttgaa
aaaacatgtcctgcaaaattatcaaaagaaaaagaggctgagatgaaacaaatgtgcata
gatgcattttcagctttaggattaaatgattatactagagtggactttcgaatggataaa
gatgagaatctttacatccttgaattaaattcaatggctagtcttggaactggtggttca
ttttatcatgctgggaaaactgctggatatacgtatgaatctctagtgaataaaatttta
gatgttgcagtaattcgctactttggttctactactcagcataatgatgaagaagtggat
ttgactcaacctttacgtgttgttgcaagaacctatctgagaagtcatttgcagagtcta
aaagagactttgaaagattatgttaatctcaatacacatgtatacaatattgaaaatgta
aatcaattaggaactaaattatctaaacgattatctcatcttggatttagtgaacaagtt
tacaaacaatctgatgttggagactttcgttatttcaaaaatcactctgattctcacaat
gatgtattattcatatctcatatggatactcattatgggccaaatgatttgataacatat
tctgaaactagtgataagatcgtaggctcaggtgttgctgaaagtaaaggtggattggta
gtgatgttaggtgcattacatgcactaagattttcaaaaagactcaaaaaaataaaatgt
ggtgtattacttacaactgatgatagtttgggtggacgacacagtagtaatttgattgaa
gagatttctaaaaattcaaaatacattcttggattaaaatcaggtagtgttgatggtgga
attattacaacttgttatggtagaagtgattatgaagttagatttacatcaacaggtgat
gaagctaattcaaacattcatggaatcatacctgttttggcaaaaaaattagctgcaatt
gataagatctcaaaagatgaaaagaattatcgattaagtacaacttctgttgtagctcaa
ggctctcatggacatactccaaattatgctacaatctcactaacatgtagttacaaaaca
gaaaaacttggagaattattagattcaaaaattaaatctgtgatgaaaaaacgagaatct
aattctaaaaaactagatgtcgcagtaaataaaattcaaacacgacatcctgtattggaa
gagccttctgatacaaaattctacaaattagtagaagatttggctaaaaaacatgaaatt
aaaattaaaaaacatgcccaactattatcctctgacattagtaatgtgccagttagactc
cctgcattggatggatttggtccattaggaaatcattatcgtacatctaaagaatacatt
attcatgacagtcttatagagagggcagcattattggcatctgtcgtcttcaagtgtgct
gcgaaatga
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