Nitrosopumilus oxyclinae: C5F49_03615
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Entry
C5F49_03615 CDS
T06689
Symbol
tfb
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
nox
Nitrosopumilus oxyclinae
Pathway
nox03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
nox00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
C5F49_03615 (tfb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nox03021
]
C5F49_03615 (tfb)
Transcription machinery [BR:
nox03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
C5F49_03615 (tfb)
Prokaryotic type
Archaeal type
TFB
C5F49_03615 (tfb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
BRF2-like_C_cyclin_rpt
Zn_ribbon_tTFIIB
RPW8
Lar_restr_allev
Ribosomal_S27e
Zn_Ribbon_Prim
Zn_ribbon_IS1595
DUF4503
RB_B
YacG
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
QLH04506
UniProt:
A0A7D5M140
LinkDB
All DBs
Position
complement(639544..640458)
Genome browser
AA seq
304 aa
AA seq
DB search
MLKNTMMSGPKCPSCGDKKMITDQNTGELFCSKCGIVVTDKISDTGAEWRSFSNDEGNKA
RTGAGTSLKMHDMGLSTVIGAANKDATGKPLSTSMKSSIERLRTWDSRSQAHSSADRNLR
QALNEMDKLKDKLALTDSVIEKAAYIYRKAMEKKLVRGRSIQGLVAACLYASCRNTETPR
TLDDIAKGINIRRKDVARCYRLIFRELELKMPVVDPVKGVSRIASIAELSEKSKRKATAI
LNQAKEMGVVAGKDPMGIAAAALYLACISTGEVKSQKEISIASGVTEVTIRNRCAGLRQM
LKDE
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgcttaaaaatacaatgatgagtggcccaaaatgtccatcatgtggcgataaaaaaatg
attacagatcaaaatacaggagagttgttctgtagtaaatgtggaatagtagttacagat
aaaatttcagatacaggtgcagaatggcgttcattttcaaatgatgaaggaaacaaagct
agaacaggtgctggtacatcattaaaaatgcacgacatgggattatctacagttatcggt
gcagcaaataaagatgcaacaggtaaaccactttcaacatctatgaaaagttcgattgaa
aggttgagaacttgggacagtagaagtcaagcacattcatcagcagatagaaatttgaga
caagcacttaatgagatggataaattaaaagataaacttgctttaacggattcagtaatc
gagaaagcagcttacatttacagaaaggcaatggagaaaaaacttgtgagaggccgctct
attcaaggattagtagcagcatgtctttatgcatcatgtagaaatacagaaactcctaga
actctagatgatattgcaaaaggaatcaacattagaagaaaagatgttgcaagatgttat
agattaatttttagagaattggaattaaagatgccagtagttgatcctgttaaaggagta
tccagaattgcaagtatcgctgaacttagcgaaaagagtaaacgaaaagcaactgcaatt
ttaaatcaagcaaaagaaatgggagtagtggcaggaaaagatccaatgggaattgcagca
gcggcactatatcttgcatgtattagtacaggtgaagtaaaatctcaaaaagaaatatca
attgcatcaggagttacagaagtgacaattagaaatagatgtgccggattaagacaaatg
ttaaaagacgaataa
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