Nitrosopumilus oxyclinae: C5F49_03875
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Entry
C5F49_03875 CDS
T06689
Name
(GenBank) TrmB family transcriptional regulator
KO
K23356
HTH-type transcriptional regulator, sugar sensing transcriptional regulator
Organism
nox
Nitrosopumilus oxyclinae
Brite
KEGG Orthology (KO) [BR:
nox00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nox03000
]
C5F49_03875
Transcription factors [BR:
nox03000
]
Prokaryotic type
Helix-turn-helix
Other families
C5F49_03875
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TrmB
HTH_20
MarR_2
MarR
HTH_11
HTH_24
Motif
Other DBs
NCBI-ProteinID:
QLH04551
UniProt:
A0A7D5M2N9
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Position
complement(687726..688574)
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AA seq
282 aa
AA seq
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MMSYQEQVTGIAIELEEILDLDDLEAKVYLNLLRAGPITASALAKELDIDRARMYRTVDK
LVSRNIISTTLSSPKLCIAADPHDALKIALGKKEDEVNKIKKSGEAIIDKINNEISTSQV
STVPTFRVVQGRQNIYADIAHLIENSTGITYIATTLDDISRMYHSTIPEKISICEKNGGQ
VRLLVDMTDPKLAPFVKRFNATETRIGKLPSKGRMVVQMDKKMIMSDSAASSHNSNADAD
FSLCTNSSEMVDNIFTLCSFLWDASKPLKTIDVKQYVRKTKS
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcatatcaagaacaagtaactggaattgcaattgaattagaagagattttagat
ttagatgatttggaagctaaagtatatcttaacttgttaagagcaggaccaattactgca
agtgctcttgcaaaagaattagatattgacagagcaagaatgtatagaactgtggataaa
ctagtaagtagaaacattatttcaacaacactatctagtccaaaattatgtattgcagca
gatcctcatgatgcattaaaaattgctttagggaaaaaagaagacgaggtaaataaaata
aaaaaatcaggagaagcaattattgataaaattaacaatgaaattagcaccagtcaagtc
agtacagttccaacatttagagtagtccaaggtcgtcaaaatatctatgctgacattgca
cacctaattgaaaattcaactggaattacatacattgcaacaacattagatgatatttca
cgaatgtatcatagcacaatacctgaaaaaattagcatttgtgaaaagaacggaggtcaa
gtcagattacttgtagatatgactgatccaaaattagcaccatttgttaaaagattcaat
gccactgaaacacgaataggaaaacttccatctaaaggaagaatggtggttcagatggat
aaaaaaatgataatgtctgactctgctgcatcgtctcataattctaatgcagatgcagat
ttttctctatgtacaaactcatcagagatggtagacaatattttcacattatgttcattt
ctatgggacgcttcaaaaccactcaaaaccatcgatgtaaaacagtatgttagaaaaaca
aaatcttag
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