Nitrosopumilus oxyclinae: C5F49_04250
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Entry
C5F49_04250 CDS
T06689
Symbol
prf1
Name
(GenBank) peptide chain release factor 1
KO
K03265
peptide chain release factor subunit 1
Organism
nox
Nitrosopumilus oxyclinae
Pathway
nox03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nox00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
C5F49_04250 (prf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nox03019
]
C5F49_04250 (prf1)
03012 Translation factors [BR:
nox03012
]
C5F49_04250 (prf1)
Messenger RNA biogenesis [BR:
nox03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
C5F49_04250 (prf1)
Translation factors [BR:
nox03012
]
Eukaryotic type
Release factors
C5F49_04250 (prf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_1
eRF1_3
acVLRF1
baeRF_family10
LRR_13
mRNA_stabil
Motif
Other DBs
NCBI-ProteinID:
QLH04610
UniProt:
A0A7D5M4W5
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All DBs
Position
complement(750044..751324)
Genome browser
AA seq
426 aa
AA seq
DB search
MPKIDIEKQDSVKIYKIRKTLEELSQKSGRGTELITVYIPKGKQLHEIINSLQQEQGTAD
NIKSDLTRSHVVDSLGKVVQRLKMYKKTPDKGLVVFCGALPPEEGGPLGSEVVTIWEIDP
PKDLNQYLYRCDDHFHVDILKDMLKDDNLIGFLAIDAKDAGWGLLHGDKIEVLSQTGSGV
AGKHRQGGQSAKRFQKLREMELSYFYNRVAQTTREYFIDIYPVKGLIISGPGPTKEDFIN
GNYLEYRLQNNIINTIDASYSGAEGIREAFAKSADILGNFRLVEEKKMVEDLFREINTNT
GKGSYGLQEVIEYLKNNVVQTLLITDNTNLHRVEGKCKRCKHLQEEIVERPLVIPKKTEF
SSKPCPGCNSMEVEVNEQDVVDYLQILSSKAGSQLEVVSGSAEHGNMLASLGKVGAILRY
NPGHSK
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgcccaagattgacattgaaaaacaagattctgttaaaatatacaaaatcagaaaaaca
ttagaagaattatctcaaaaatctggcagaggtactgaattaattacagtgtatattcca
aaaggaaaacaattacacgaaattattaattcattacaacaagagcaaggaaccgcagat
aatatcaaatcagatttaacaagatcacatgtagttgattcactaggtaaagttgttcaa
agattaaagatgtacaaaaaaactccagataaaggactagtggtgttttgcggagcattg
ccgccagaagaaggagggcctctaggaagtgaagtggttacaatttgggagatagaccca
ccaaaagatttgaatcaatatctgtacagatgtgatgatcatttccatgtagatattcta
aaagacatgctaaaagatgacaacctgattggatttttagcaattgatgcaaaagatgca
ggctggggattactacatggagataaaatagaggttttatcccaaacaggttcaggtgtt
gcaggtaaacacaggcaaggtggacagtctgctaaaagatttcaaaaactaagggagatg
gaactaagttatttttacaacagagtggcacaaaccaccagagagtattttattgacatt
tacccagtaaaaggattaatcatttcagggccaggacccaccaaagaggatttcataaat
gggaattatttagaatacagattacaaaataatattatcaatacaattgatgcatcatat
tcaggagcagaaggcataagagaagcttttgcaaaatctgcagatattttaggaaatttc
agattggttgaagagaagaaaatggtcgaggatttgtttagagagatcaacaccaatacc
ggaaaaggatcttatggtttgcaagaagtaatagagtatctaaaaaataatgttgttcaa
actttgttaattacagataacacgaatcttcacagagttgaagggaaatgtaagcgttgt
aaacatcttcaagaagagatagttgaaagaccactggtaattccaaaaaagacagaattt
tcttcaaaaccatgcccaggatgtaattctatggaggtagaagttaacgaacaagatgtg
gtagactatttacaaattttatcttcaaaagctggctctcagttagaagttgtttcaggt
agtgcagagcatggaaacatgcttgcaagtttaggaaaagttggagcaatactgagatac
aatccaggccattctaaataa
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