Nitrosopumilus oxyclinae: C5F49_05955
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Entry
C5F49_05955 CDS
T06689
Name
(GenBank) tRNA uridine(34) 5-carboxymethylaminomethyl modification radical SAM/GNAT enzyme Elp3
KO
K07739
elongator complex protein 3 (tRNA carboxymethyluridine synthase) [EC:
2.3.1.311
]
Organism
nox
Nitrosopumilus oxyclinae
Brite
KEGG Orthology (KO) [BR:
nox00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nox03016
]
C5F49_05955
Enzymes [BR:
nox01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.311 tRNA carboxymethyluridine synthase
C5F49_05955
Transfer RNA biogenesis [BR:
nox03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
C5F49_05955
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM_C
Radical_SAM
ELP3_N
Acetyltransf_10
Acetyltransf_7
Acetyltransf_1
Motif
Other DBs
NCBI-ProteinID:
QLH05593
UniProt:
A0A7D5M374
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All DBs
Position
1026306..1027892
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AA seq
528 aa
AA seq
DB search
MNKLDPITSKACDEITQNLLTIQEPSKKQVKEEIIKICTKYALSRIPKNYEILSMAKESD
FDKLKKMLIRKPAKTASGVSVVALMPKPYACPHGRCTYCPGGIEFNSPNSYTGKEPSSLN
AIENEFDPKLQITSKIEKLIAFGHDPSKMEVVIVGGTFLFMPKDYQKDFIKSCYDALNGT
DSKDLEEAKSNNEHASIRNVGFTIETKPDYCKKEHVDLMLSYGITRVEIGVQSLQERVYK
IVNRGHDYNDVVESFQISKDAGYKLVAHMMPGLPTMKPEEDIADFKKLFSDPQLRPDMLK
IYPSLVIENTPLYEEYKQGKYTPYSDEDMIKVLTEAKKNVPKWVRIMRIQREITPGEIIA
GPKSGNLRQIVHQNLAKQGLSCKCIRCREAGLTDKKTNGGEIKLNRINYDSSGGKEVFLS
YEDKNESIYGFLRLRKPSIDAHRDEINQDTCIVREIHVYGKSLKLGEKEDDEIQHSGLGK
NLMKEAEKISKEEFDAKKLLVISAVGTREYYQKLGYSLYGPYMSKTLN
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagcttgaccccatcacatccaaagcatgtgatgaaattactcagaatcttcta
acaattcaagagccaagcaaaaaacaagtaaaagaagaaattataaaaatttgcaccaaa
tatgcactaagtagaattccaaaaaattatgaaatattatcaatggcaaaggaatcagat
ttcgataaactaaaaaaaatgttgattagaaaaccagctaaaacagcatcaggcgtatca
gtagtggcattaatgccaaaaccatatgcatgccctcatggaagatgcacgtattgtcca
ggcggaattgaatttaattccccaaatagctatacaggaaaagaaccatcatcattaaat
gcaattgaaaatgagtttgatcctaaattacaaatcacttcaaagattgaaaaattaatt
gcatttggacacgacccatctaaaatggaagtagtgatcgtaggagggacatttctattc
atgccaaaagattatcagaaagatttcatcaaatcatgttatgatgcattaaacgggaca
gattcaaaagatttggaggaagcaaaatcaaacaatgaacatgcatcaataagaaacgta
ggatttacaattgagacaaaaccagattactgcaaaaaagaacatgtggatttaatgtta
agttatggaatcacaagagttgaaattggagttcagtcattacaagaaagagtttacaaa
atagtaaacagaggacacgattacaatgatgtggtagaatcatttcaaatttcaaaagat
gcaggttacaaactagttgcacatatgatgccaggacttcctacaatgaaaccagaagaa
gacattgcggattttaaaaaattattttcagacccacaattgcgtccagatatgttgaaa
atttatccatcactagttattgaaaataccccattatacgaagaatacaagcaagggaaa
tacacaccatattcagatgaagatatgatcaaagtgctaacagaggctaaaaaaaatgtc
ccaaagtgggtgagaattatgagaatccaaagagaaataactccaggtgagattattgca
ggaccaaaatcaggaaatttaaggcaaatcgtacatcaaaatcttgcaaaacaaggactt
tcttgcaaatgtatcagatgtagagaagcaggattaactgacaaaaaaacaaacggagga
gaaataaaactaaacagaattaattatgattcatccggaggaaaagaagtattcttgtca
tatgaggacaaaaatgaatcaatttatggatttttgagattgcgaaaacccagcattgat
gcacatagagatgaaattaatcaagatacttgcatagtaagagaaattcacgtttatggg
aaatcattgaaactaggtgaaaaagaagatgatgaaatccaacattcaggtttaggaaaa
aatttgatgaaggaagctgaaaaaatatctaaagaagaatttgatgctaaaaaacttcta
gtgattagcgcagtaggtacaagagaatattatcaaaaactagggtattcgttatatggg
ccatacatgtccaagacattgaattag
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