Nitrosopumilus oxyclinae: C5F49_06765
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Entry
C5F49_06765 CDS
T06689
Name
(GenBank) hypothetical protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
nox
Nitrosopumilus oxyclinae
Brite
KEGG Orthology (KO) [BR:
nox00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nox03400
]
C5F49_06765
DNA repair and recombination proteins [BR:
nox03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
C5F49_06765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF87
TrwB_AAD_bind
HAS-barrel
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
QLH05052
UniProt:
A0A7D5M2D7
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All DBs
Position
1172231..1173763
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AA seq
510 aa
AA seq
DB search
MSLGFVIGESKPTIVTAITSRALSVGEYIKISTDEGEILGLVERSSVSSAAFTDVRNFDE
ASESTEIAELNKRDKTFTAHIGILGFLKNLRKGQSIIPAIPPIPGTEITLPSEQDLKEIF
SPEKEGWVSIGNLLRNKSIDAKVNLDKIVSRHLGILAMTGMGKSNLVSLITKQISKLKGT
VIIFDYHNDYTSLNIPRINVIDAKINPRLLDADQLSEVLEIRDGANVQQRVLRMAFTKHV
KESKEFWSKLENEVEFIVNSEDKKLKEIRTSAYRVQDIIEDAQRRFEDILDPDMGDPISF
IKEGRTNILNISELSEKQANVAVAFYLQQLLKDRKDASIARHRKTKRERNFRFNSPIFVI
IEEAHVFIPKDHDTSAKYWAAKIAREGRKFGLGLGVVSQRPRSVDLNVLSQMGSFAIMKI
IQEDDQRQIASATESTSRELIAQLTSLNVGDAVLVGQWTNLPSLVHVEEVKEKVMGADQS
AVNAWAKAEKMNEVAVESTQGLVQKDLLLD
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
ttgagtttaggttttgtaattggggaatcaaaacctacaattgttacagcaatcacatca
agagcgttatcagtaggagaatatatcaaaattagtacagatgaaggagaaatcttagga
ctagtagaaagatcgtcagtatcaagtgcagcatttacagatgtaaggaattttgatgaa
gcttcagaaagtactgaaattgctgaattaaacaaaagagacaaaactttcactgcacat
attggaattttaggatttttaaaaaatctaagaaaaggtcaatcaatcatacctgcaatt
cccccaattccaggcacagaaattactttgccaagtgaacaagacttgaaagaaattttc
agtccagaaaaagaaggatgggtaagtattggaaatcttttacgaaataaatcaattgat
gccaaagtgaatttggataaaattgtgtcaagacatttaggaattcttgcaatgacaggt
atgggtaaaagtaatctagtatcattaattacaaaacaaatttcaaaattaaaaggaact
gtaataatttttgattatcacaatgactatacaagtctaaacattccacgaattaatgta
attgatgcaaagattaatcccagactattagatgctgatcagttatcagaagtattagaa
atcagagacggtgctaatgttcaacaacgtgttttgagaatggcatttacaaaacatgta
aaagaatcaaaagaattttggagtaaattagagaatgaagtagaatttattgtaaattct
gaagataaaaaattaaaagaaattaggacatcagcatatagagttcaagacattatagaa
gacgctcagagaagatttgaagatattttagatccagatatgggagacccaattagtttc
atcaaagaaggtagaacaaatattctaaatatttcagaactatctgaaaaacaggcaaat
gtagcagttgcattttatctacagcaattactcaaagatagaaaagatgcaagtattgca
agacacagaaaaactaagagagaaagaaatttcagatttaattcaccaatttttgtaatc
attgaagaagcgcatgtcttcattccaaaagaccacgacactagtgcaaaatattgggct
gctaaaattgccagagaaggtcgaaagttcgggctggggttaggagttgtttctcagcga
cccagaagtgtggatcttaacgttctcagtcagatgggatcatttgcaataatgaaaata
attcaagaagatgaccagcgacaaatagcctcagcaacagagtcaactagtcgtgaatta
attgctcaattaacatcactaaacgtaggagacgcagttcttgttggacaatggactaat
cttccatcattggttcacgtggaagaggtaaaagagaaggtaatgggggcagatcaaagt
gcagttaatgcatgggcaaaagcagaaaaaatgaatgaggttgcagtggaatcaactcaa
gggttggtacaaaaagatttgttattagactaa
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