Nitrosopumilus oxyclinae: C5F49_07955
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Entry
C5F49_07955 CDS
T06689
Name
(GenBank) DNA repair protein
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
nox
Nitrosopumilus oxyclinae
Pathway
nox03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nox00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
C5F49_07955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nox03400
]
C5F49_07955
Enzymes [BR:
nox01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
C5F49_07955
DNA repair and recombination proteins [BR:
nox03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
C5F49_07955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
HHH
FeoB_Cyto
HHH_5
HHH_2
DUF512
Motif
Other DBs
NCBI-ProteinID:
QLH05259
UniProt:
A0A7D5R5H2
LinkDB
All DBs
Position
1367021..1367863
Genome browser
AA seq
280 aa
AA seq
DB search
MQNNCTINVENSINSGQVFLWRKNNDIWYGVNGQDILKISKVGKIKSYQNIKTDFFRKRD
DIEKIIKSISKDSVTKKAVKQYLGLRILEQDPFQCLISFIVSSNSNIQKIKNSLEKISKK
FGEKVEFENQEFFLFPKPEIIAKASINEIKSCGVGYRAKFIKEAANMMALKKINFEYLKK
CNYQDAKEEICKIPGVGNKVADCILLFSLNKLESFPLDRWMIRILEKYYSDKFQLETKSI
TEKQYEILHEKIVNHFGPYAGYAQQFLFKMERENYQKKWL
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaataattgcacaataaatgtcgaaaattcaattaatagcggtcaagtatttctt
tggagaaaaaacaatgatatctggtatggggttaatggacaagatattttaaaaatttca
aaagtagggaaaattaaatcatatcaaaatataaaaacagattttttccgaaaaagagat
gatattgaaaaaataattaaatcaatttctaaagatagcgttaccaaaaaagctgtaaaa
caatatttgggattgagaattctagaacaagatccatttcaatgtctaatttcttttatt
gtatcatcaaactctaacatccaaaaaattaagaatagtttagaaaaaatatcaaaaaaa
tttggagaaaaggttgaatttgaaaatcaagagttttttttatttccaaaaccagaaatt
attgctaaagcatcaataaatgaaattaaaagttgtggagttggttatcgtgccaaattt
atcaaagaggctgcaaatatgatggctttaaaaaaaataaattttgaatacttgaagaaa
tgtaattatcaagatgcaaaggaagagatttgtaaaattccaggtgtaggaaacaaagtt
gcagattgtattttattattttcattaaacaaattggaatctttcccattagatagatgg
atgatcagaatattagaaaaatattattcagataaattccaattagaaacaaaatcaata
actgaaaaacaatatgaaattcttcatgaaaaaattgtaaatcattttggaccatatgca
ggatatgcacaacaatttcttttcaaaatggaaagagaaaattaccaaaagaagtggctg
taa
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