Nitrosopumilus oxyclinae: C5F49_08095
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Entry
C5F49_08095 CDS
T06689
Name
(GenBank) RNA-binding protein
KO
K07573
exosome complex component CSL4
Organism
nox
Nitrosopumilus oxyclinae
Pathway
nox03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nox00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C5F49_08095
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nox03019
]
C5F49_08095
Messenger RNA biogenesis [BR:
nox03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
C5F49_08095
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
C5F49_08095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ECR1_N
S1_RRP4
Motif
Other DBs
NCBI-ProteinID:
QLH05284
UniProt:
A0A7D5R931
LinkDB
All DBs
Position
1398771..1399322
Genome browser
AA seq
183 aa
AA seq
DB search
MSENAIFPGDKIASIEEYEAGNNAFDDGDMVRAATIGEKDIDKASRTVNVKHPKLLSIPK
VGDIIIGTVAAVMSSMIAVSIDYINGKPTTSKVECICGTRNLRIRNVALVNDIVTLKILN
HLNGTIHASISEPNLGILFTKCRKCGGKVIPMRDAIKCTDCAWIDERKLSANFGNSDFVN
LRD
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaaatgcaatatttccaggagacaaaatagcatctattgaagaatatgaggca
ggaaataatgcttttgacgatggagacatggttagagcagcaactattggagaaaaagat
attgacaaggcatcacgaactgtaaatgtaaaacacccaaaacttttatcgattccaaag
gtaggagacatcattattggaacagtagcagcagtcatgtcatctatgattgcagtttca
attgattacattaatggaaaacctacaacatcaaaagttgaatgtatttgtggaacacga
aatttaagaataagaaatgttgcattagttaatgatatagttacattaaaaattctaaat
catcttaatggaactattcacgcatctattagtgaaccaaatttaggaattttatttaca
aaatgtagaaaatgtggtggaaaagttattccaatgcgtgatgcaataaaatgtacagat
tgtgcatggattgatgagagaaaactttctgcaaactttggaaatagtgacttcgtaaat
ttaagagattaa
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