Nitrosopumilus oxyclinae: C5F49_08310
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Entry
C5F49_08310 CDS
T06689
Name
(GenBank) transcription factor
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
nox
Nitrosopumilus oxyclinae
Pathway
nox03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
nox00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
C5F49_08310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nox03021
]
C5F49_08310
Transcription machinery [BR:
nox03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
C5F49_08310
Prokaryotic type
Archaeal type
TFE
C5F49_08310
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
D5_N
TrmB
Sigma70_r3
DUF7086
EDR4-like_1st
Motif
Other DBs
NCBI-ProteinID:
QLH05321
UniProt:
A0A7D5RBI5
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All DBs
Position
1431728..1432243
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AA seq
171 aa
AA seq
DB search
MVDKYEDPFVRIASMIGGDEYLKVARSLLKAEDATDEEIASSTGLRINMVRKVLYDLFGK
SLITGIRVKDERKGWFVYRWRTRREEVEHFIENQKKKIDERLQQRLDYENASDFYHCGNE
DCPRVTFESALDGMFKCPSCQNVLNLKKNDKSRKAYQKKIDEIKQDMQQTF
NT seq
516 nt
NT seq
+upstream
nt +downstream
nt
ttggtagataaatacgaagatccttttgttagaatcgcctcaatgattggaggagatgaa
tatctcaaagtagcaagatctcttctaaaagcagaagatgctactgatgaagaaattgct
agttctacaggtcttagaatcaatatggtaagaaaagtattgtatgatctatttggaaag
tctctcattactggtattagagttaaagatgaaagaaaaggatggtttgtctacagatgg
agaactagaagagaagaagtagagcattttattgaaaatcaaaaaaagaaaatcgatgaa
agattacaacagagattagattatgagaatgcttcagatttctatcactgtggaaacgaa
gattgccctagagtgacatttgaaagtgctcttgatggaatgttcaaatgcccatcatgt
caaaatgttttgaatctaaaaaagaatgataaatcaagaaaagcatatcaaaagaaaatt
gacgagatcaaacaagatatgcaacagacattttga
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