KEGG   Nitrosopumilus oxyclinae: C5F49_08310
Entry
C5F49_08310       CDS       T06689                                 
Name
(GenBank) transcription factor
  KO
K03136  transcription initiation factor TFIIE subunit alpha
Organism
nox  Nitrosopumilus oxyclinae
Pathway
nox03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:nox00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    C5F49_08310
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:nox03021]
    C5F49_08310
Transcription machinery [BR:nox03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIE
     C5F49_08310
 Prokaryotic type
  Archaeal type
    TFE
     C5F49_08310
SSDB
Motif
Pfam: TFIIE_alpha D5_N TrmB Sigma70_r3 DUF7086 EDR4-like_1st
Other DBs
NCBI-ProteinID: QLH05321
UniProt: A0A7D5RBI5
LinkDB
Position
1431728..1432243
AA seq 171 aa
MVDKYEDPFVRIASMIGGDEYLKVARSLLKAEDATDEEIASSTGLRINMVRKVLYDLFGK
SLITGIRVKDERKGWFVYRWRTRREEVEHFIENQKKKIDERLQQRLDYENASDFYHCGNE
DCPRVTFESALDGMFKCPSCQNVLNLKKNDKSRKAYQKKIDEIKQDMQQTF
NT seq 516 nt   +upstreamnt  +downstreamnt
ttggtagataaatacgaagatccttttgttagaatcgcctcaatgattggaggagatgaa
tatctcaaagtagcaagatctcttctaaaagcagaagatgctactgatgaagaaattgct
agttctacaggtcttagaatcaatatggtaagaaaagtattgtatgatctatttggaaag
tctctcattactggtattagagttaaagatgaaagaaaaggatggtttgtctacagatgg
agaactagaagagaagaagtagagcattttattgaaaatcaaaaaaagaaaatcgatgaa
agattacaacagagattagattatgagaatgcttcagatttctatcactgtggaaacgaa
gattgccctagagtgacatttgaaagtgctcttgatggaatgttcaaatgcccatcatgt
caaaatgttttgaatctaaaaaagaatgataaatcaagaaaagcatatcaaaagaaaatt
gacgagatcaaacaagatatgcaacagacattttga

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