Nitrosopumilus oxyclinae: C5F49_08960
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Entry
C5F49_08960 CDS
T06689
Symbol
pcn
Name
(GenBank) proliferating cell nuclear antigen (pcna)
KO
K04802
proliferating cell nuclear antigen
Organism
nox
Nitrosopumilus oxyclinae
Pathway
nox03030
DNA replication
nox03410
Base excision repair
nox03420
Nucleotide excision repair
nox03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nox00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C5F49_08960 (pcn)
03410 Base excision repair
C5F49_08960 (pcn)
03420 Nucleotide excision repair
C5F49_08960 (pcn)
03430 Mismatch repair
C5F49_08960 (pcn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nox03032
]
C5F49_08960 (pcn)
03400 DNA repair and recombination proteins [BR:
nox03400
]
C5F49_08960 (pcn)
DNA replication proteins [BR:
nox03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
C5F49_08960 (pcn)
DNA repair and recombination proteins [BR:
nox03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
C5F49_08960 (pcn)
MMR (mismatch excision repair)
Other MMR factors
C5F49_08960 (pcn)
TLS (translesion DNA synthesis) factors
Other TLS factors
C5F49_08960 (pcn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PCNA_N
PCNA_C
Rad9
Receptor_2B4
Motif
Other DBs
NCBI-ProteinID:
QLH05439
UniProt:
A0A7D5R5N3
LinkDB
All DBs
Position
complement(1543186..1543932)
Genome browser
AA seq
248 aa
AA seq
DB search
MTFGAKTSGSDDLKAIISAISTLVEEATFVATAEGITFRGMDPSHVALIDISWPNSAFEK
YECDSDIKFGVRIDEFSKLIKRADKKDSIEISISEQNMLLVTVGKNKKYKMRLIESSATD
TPLPKIPYDSKIVLTSSKFDKILGDVQVVSDYLTIQTSDSKGDFSGKGDSGEVVIELDKD
DKEIEEISSKEDSVGTYSLEYLNPVVKAVGSNAGSITCEFSSAKPLRIEFKVANIGRIHF
YLAPRVES
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
ttgacttttggtgcaaaaacaagtggatctgatgatctaaaagctatcatttctgcaata
tctacacttgttgaggaagcaacttttgttgcaacagcagaaggaattacttttagagga
atggatccatcacatgtagctttgatagatatctcatggccaaattctgcatttgaaaaa
tatgaatgtgatagtgatattaaatttggtgtaagaatagatgaattttcaaaacttatc
aaaagagcagataaaaaagatagcattgagatcagtatctctgaacaaaacatgttactt
gtaacagttggaaaaaataaaaaatacaaaatgcgattaattgaaagttctgcaactgat
actccattaccaaaaatcccttatgactcaaaaattgttttaacctcatcaaagtttgac
aaaattcttggtgatgtacaggttgtatctgattatcttactatccaaacatctgattca
aaaggggacttttctggaaaaggtgattctggtgaagttgtaattgaacttgacaaagat
gataaagaaattgaagaaatttcttcaaaagaggacagtgttggtacatacagtcttgaa
tatctaaatcctgtagtcaaagcagtaggttccaatgcaggctcaattacatgtgagttt
tcaagcgcaaagcctcttagaattgaatttaaagtagcaaatatcggtagaattcacttt
tacctcgctccacgcgtcgaaagttaa
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integrated database retrieval system
