Nocardioides euryhalodurans: EXE57_05220
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Entry
EXE57_05220 CDS
T05931
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
noy
Nocardioides euryhalodurans
Pathway
noy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
noy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EXE57_05220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
noy03021
]
EXE57_05220
03019 Messenger RNA biogenesis [BR:
noy03019
]
EXE57_05220
Transcription machinery [BR:
noy03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
EXE57_05220
Messenger RNA biogenesis [BR:
noy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
EXE57_05220
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
Motif
Other DBs
NCBI-ProteinID:
QBR94336
UniProt:
A0A4P7GQ09
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All DBs
Position
complement(1115092..1116840)
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AA seq
582 aa
AA seq
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MLIADLKAMAGGLGISGAGSMKKADLVAAIKSAQSGGGAPAREKSAPATRPEQGQDQDRR
DGRRQREQQQDRGEKQDRGEKHDRSEKHDRSEKQDRSEKQDRDQGREKSRDQDRGDQRQD
RDQGREKNRDQDRGDQQQDRDQQDRDKGQHQGSQSGRSDDRRNDPNASRSSRRRRGRDRS
RTGGGGGSTGSQRSEPDTTVLEDDVLLPAAGILDVLDNYAFVRTSGYLPGADDVYLSLSM
VRKFGLRRGDAIVGQVRQPREGDRKEKFNPMVRVDSVNGADPEAARNRVEFSKLTPLYPS
ERLRLETEPTNLIGRVIDIAAPIGKGQRGLIVSPAKAGKTMIMQSIANSITTNNPECHLM
VVLVDERPEEVTDFERSVKGEVISSTFDRPASDHTTVAELAIERAKRLVELGHDVVVLLD
GITRLGRAYNLAAPASGRILSGGVDSAALYPPKRFFGAARNIENGGSLTILATALIESGS
KMDEVIFEEFKGTGNMEIRLRRDFADKRLYPAIDAVQSGTRREELLMSREELAIVWKLRR
VLSGLDGQQALELLLERLKKSQSNIEFLMQVQKTTPSVGKDD
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgctgatcgccgacctcaaggcgatggccggcggcctgggcatctccggcgccggctcc
atgaagaaggccgacctcgtggccgccatcaagtccgcccagtccggcggcggcgccccc
gcccgcgagaagtccgcaccggccacgcgtccggagcagggccaggaccaggaccgtcgc
gacggccggcgccagcgcgagcagcagcaggaccgcggcgagaagcaggaccgcggcgag
aagcacgaccgcagcgagaagcacgaccgcagcgagaagcaggaccgcagcgagaagcag
gaccgggaccaggggcgcgagaagagccgcgaccaggaccgcggcgaccagcggcaggac
cgcgaccaggggcgcgagaagaaccgcgaccaggaccgcggcgaccagcagcaggaccgt
gaccagcaggaccgcgacaagggccagcaccagggcagccagtccggtcgctccgacgac
cggcgcaacgacccgaacgccagccgcagcagccggcgtcgccgcggccgcgaccgcagc
cgcaccggcggcggtggcggcagcaccggcagccagcgcagcgagcccgacaccacggtc
ctcgaggacgacgtgctgctccccgcggcgggcatcctcgacgtgctcgacaactacgcc
ttcgtccggaccagcggctacctccctggcgccgacgacgtctacctgtcgctctcgatg
gtccggaagttcgggctgcgccgcggcgacgccatcgtgggccaggtgcgccaaccccgc
gagggcgaccgcaaggagaagttcaacccgatggtgcgggtcgacagcgtcaacggcgcc
gaccccgaggccgcgcgcaaccgggtcgagttctccaagctgacgccgctctaccccagt
gagcggctgcggctcgagaccgagcccaccaacctgatcggccgggtcatcgacatcgcc
gcgccgatcggcaagggccagcgcggcctcatcgtctcgcccgccaaggccggcaagacg
atgatcatgcagtcgatcgcgaactcgatcaccaccaacaaccccgagtgccacctgatg
gtcgtcctcgtcgacgagcgtcccgaggaggtcaccgacttcgagcggtcggtgaagggc
gaggtcatctcctcgaccttcgaccgcccggccagcgaccacacgacggtcgccgagctc
gccatcgagcgcgccaagcgcctcgtcgagctcggccacgacgtggtcgtgctgctcgac
ggcatcacccggctcggccgcgcctacaacctcgccgccccggcgagcggccggatcctc
tccggtggtgtcgactcggccgcgctctacccgcccaagcgcttcttcggcgccgcccgc
aacatcgagaacggcggctcgctgacgatcctcgccaccgccctcatcgagagcggctcc
aagatggacgaggtgatcttcgaggagttcaagggcaccggcaacatggagatccggctg
cgccgcgacttcgccgacaagcgcctctaccccgcgatcgacgccgttcagtcgggcacc
cgccgcgaggagctgctgatgtcgcgcgaggagctggcgatcgtgtggaagctccgccgc
gtgctctcgggcctcgacggccagcaggccttggagctgctgctcgagcggctcaagaag
tcgcagagcaacatcgagttcctgatgcaggtccagaagacgacgccgagcgtgggcaag
gacgactga
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