Nocardioides euryhalodurans: EXE57_06125
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Entry
EXE57_06125 CDS
T05931
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
noy
Nocardioides euryhalodurans
Pathway
noy03420
Nucleotide excision repair
noy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
noy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EXE57_06125
03430 Mismatch repair
EXE57_06125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
noy03400
]
EXE57_06125
Enzymes [BR:
noy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EXE57_06125
DNA repair and recombination proteins [BR:
noy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EXE57_06125
MMR (mismatch excision repair)
Other MMR factors
EXE57_06125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QBR94349
UniProt:
A0A4P7GQP0
LinkDB
All DBs
Position
complement(1302986..1306165)
Genome browser
AA seq
1059 aa
AA seq
DB search
MQARFPVSEEQWPAVSAPLEPTVVIAGAGSGKTTLMAARVVYLVATGQVRADEVLGLTFT
SKAAGELAIDIRVALSRAGLLPEVATEDEERLEPTVATYNAYAASLLTEQGLRIGHEPDT
RVMADASRYQLAGRAVARHTHEVQLLTDSPKHVIGNLLALDGAMSEHLVAPDDVRAFDAR
EQRAMEAALATEKAKADLQKVLDKIAERAELLRLVEDYRRLKRELGLMDFSDQIELATRL
AREHPDVGAGERAKFRIVLLDEYQDTSVAQSMLLGALFSGPDAGQGRGHAVTAVGDPNQA
IYGWRGASVSNILHVGRTFPRADGSPDIPRHQLTVSRRSDASILEAANHLARPLYADPAV
PLTPLRPAEGAAPGEVRASLHPSVAAELAWLPGQVHAAQRDIAALPEDPREPGTWRRIGV
LTRDNATAAEVFDALTADGIPVEIVGLNGLLRLPEVSMVVSTLTLLHDLTANADLLNLLT
GPRWAIGPRDLAILGRRARDLAADPEGRSSRGRLIDELEQAVAGADPTEILSLCDAIDDP
GDATYPYSAAARERFALLSGELRMLRRHGGESLLDLVRLIIDTTGIDVELASSTSAAASA
RRDNLDLFVKAVAEFQAIDGDHSLGSLLAYLEAEDELGTGLDVATPTEADSVKLLTVHRA
KGLEWDAVFLVGVSEKKFPTERSRSLWTSVGWVLPSPLRGDAVDLPQLTERTRAGLEDFK
KRSREHEAVEELRLGYVAVTRARSLLSVSSHWRLYRAAPIGPSRYQQAVVEAIAARGASP
EPWTPEPEVAELAAIGPEPQPWPVTEHTAEALRRLEASELVREVDPAADDDELDLASLAE
VQAWDDAIERLLDEARADRADVVDVPLPSSLSATALARLRDDPEGFARDLARPMPRPPAP
AARFGTRFHAWVEARFGQQQLIDADELPGRADAEIDDADDLAALVAAFESGPFADRAPHA
VEAPFALVLAGQVVRGRIDAVYAEPDGSFLVVDWKTNRRRTADPLQLALYRLAWAELTGV
PLDRVRAGFFYVRHGELVEPEALPGREELEGLVSPAATP
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atgcaggccaggttccccgtcagcgaggagcagtggccggccgtcagcgcgccgttggag
ccgacggtcgtgatcgccggcgccgggtccggcaagacgacgctgatggcggcccgggtc
gtctacctcgtcgccaccggccaggtgcgcgccgacgaggtgctgggcctcaccttcacg
tccaaggccgccggcgagctcgccatcgacatccgggtcgcgctctcccgggccgggctg
ctgcccgaggtcgccaccgaggacgaggagcggctcgagccgaccgtggcgacctacaac
gcctacgcagcctccctgctcaccgagcagggcctgcggatcggccacgagcccgacacc
cgggtgatggccgacgcctcccgctaccagctcgccggacgcgccgtggctcgccacacc
cacgaggtccagctcctcacggacagccccaagcacgtcatcggcaacctgctggccctc
gacggcgcgatgagcgagcacctcgtggcgcccgacgacgtccgggcgttcgacgcgcgc
gagcagcgcgcgatggaggcggcgctcgcgacggagaaggccaaggccgacctccagaag
gtgctcgacaagatcgccgaacgcgccgagctgctccggctcgtcgaggactaccgccgg
ctcaagcgggagctggggctgatggacttctccgaccagatcgagctcgccacccggctc
gcccgcgagcaccccgacgtgggggcgggggagcgggccaagttccggatcgtgctgctc
gacgagtaccaggacacctccgtcgcgcagtcgatgctgctcggcgcgctcttctccggc
cccgacgccgggcaggggcgcggtcacgccgtgaccgccgtcggagaccccaaccaggcg
atctacggctggcgcggagcgtcggtgtccaacatcctccacgtcgggcgcacctttccc
cgggccgacggctcacccgacatcccgcgccaccagctcacggtgagccgacggtccgac
gcctcgatcctggaggcggccaaccacctcgcgcggccgctctacgccgaccccgccgtg
ccgctcacgccgctgcgaccggccgagggtgccgcaccgggcgaggtgcgcgccagcctc
cacccgagcgtggccgcggagctggcgtggctgcccggccaggtgcacgccgcccagcgg
gacatcgcagccctccccgaggatccccgcgagcccgggacctggcgccggatcggtgtg
ctcacgcgtgacaacgccacggcggccgaggtcttcgacgccctgaccgccgacgggatc
ccggtcgagatcgtcggactcaacggcctgctccgcctgcctgaggtctcgatggtggtc
tcgacgctcaccctgctccacgacctgaccgccaacgccgacctgctcaacctcctcacg
ggtccccggtgggcgatcgggccgcgtgacctggcgatcctgggccgtcgcgcccgcgac
ctggccgccgaccccgaggggcgctcctcccgcgggcggctcatcgacgagctcgagcag
gccgtcgccggggctgacccgaccgagatcctgtccctctgcgacgccatcgacgacccc
ggtgacgccacctacccctactccgcggccgcgcgggagcggttcgcgctgctctccggg
gagctgcggatgctccgtcgtcacggcggggagtcgttgctcgacctggtgcggctgatc
atcgacaccaccggcatcgacgtcgagctggcctcctccacctcggcggcggcctccgcc
cggcgcgacaacctcgacctcttcgtgaaggccgtcgcggagttccaggccatcgacggc
gaccactccctcgggtccttgctcgcctacctcgaggccgaggacgagctcgggaccggc
ctcgacgtcgccaccccgaccgaggccgactcggtgaagctgctgaccgtccaccgcgcc
aaggggctggagtgggacgcggtgttcctggtcggggtcagcgagaagaagttccccacc
gagcgctcccgcagcctgtggacctcggtgggctgggtgctgccctcaccactgcggggc
gacgccgtggacctgccgcagctcaccgagcgcacccgcgccgggctcgaggacttcaag
aagcggagccgcgaacacgaggcggtcgaggagctccggctcggctacgtcgcggtcacc
cgcgcccgcagcctgctcagcgtctcctcccactggcgcctctaccgcgcggcgccgatc
ggcccctcccgctaccagcaggcggtggtggaggcgatcgctgcccgcggcgcgtcaccg
gagccgtggacgccggagcccgaggtggcggagctcgccgccatcggtcccgagccgcag
ccctggccggtcaccgagcacaccgccgaggcgctgcggcggctcgaggcctccgagctc
gtgcgcgaggtcgacccggccgccgacgacgacgagctcgacctcgcctcgctggcggag
gtgcaggcgtgggacgacgcgatcgagcggctgctcgacgaggcgcgggccgaccgggcc
gacgtcgtcgacgtacccctgccgtcgagcctgtccgccacggcactggcgcggttgcgg
gacgaccccgagggcttcgcccgcgacctggcccggccgatgccgaggccgccggctccg
gcggcccgcttcggcacccgcttccacgcctgggtggaggcgcgcttcgggcagcagcag
ctgatcgacgccgacgagctccccggacgcgccgacgccgagatcgacgacgccgacgac
ctcgccgcgctggtcgccgccttcgagtcagggcctttcgccgaccgtgccccccacgcc
gtggaggcgcccttcgcgctggtgctggccggccaggtggtgcgcggccggatcgacgcc
gtctacgccgagcccgacgggagcttcctcgtcgtcgactggaagaccaaccgccggcgc
accgccgacccgctccagctcgccctctaccgcctggcgtgggccgagctcaccggcgtg
ccgctcgaccgggtccgcgccggcttcttctacgtccgccacggcgagctcgtggagccg
gaggccctgcccggtcgtgaggagctcgagggcctggtcagcccggctgcgacgccgtga
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