Nocardioides euryhalodurans: EXE57_08980
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Entry
EXE57_08980 CDS
T05931
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
noy
Nocardioides euryhalodurans
Brite
KEGG Orthology (KO) [BR:
noy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
noy03032
]
EXE57_08980
03400 DNA repair and recombination proteins [BR:
noy03400
]
EXE57_08980
Enzymes [BR:
noy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
EXE57_08980
DNA replication proteins [BR:
noy03032
]
Prokaryotic type
DNA Topoisomerases
EXE57_08980
DNA repair and recombination proteins [BR:
noy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
EXE57_08980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Hjc
Motif
Other DBs
NCBI-ProteinID:
QBR92405
UniProt:
A0A4P7GK73
LinkDB
All DBs
Position
complement(1893330..1894325)
Genome browser
AA seq
331 aa
AA seq
DB search
MPRLRRTSCDGPGWTRRRAGSGFVYLDADGARLPDEDAQRCRDLVIPPAWRDVWICPLAN
GHLQAVGTDDAGRRQYLYHPDWRTKRDGEKHVRVLGFGKVLSRAREQILVDLGTEGMPHA
RACATAVRLLDLGYFRIGNDVYADQNGSFGLTTLQRRHVRRQGDALVFCFEGKSGVEHSV
TIDDPHAIGALEVMRRRRGGDQLLAWKEGRSWRDLHSSHVNDYLREATGEDYSAKDFRTW
HATVLAAASLAESEEPGESKASRKRAVSAAMKEVAEFLGNTPALAKSSYVDPRVVDAYEE
GRTIAATARRSHRTADERQAALERAVLRLLR
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgccgcggctgcgacgtacctcctgcgacgggccgggctggacgcgtcgtcgcgcgggc
tccggcttcgtctacctcgatgccgacggagcccggctgcccgacgaggacgcccagcgc
tgccgcgacctggtgatcccgcccgcctggcgggacgtgtggatctgcccgctggccaac
ggccacctgcaggccgtgggcaccgatgacgccggccggcgtcagtacctctaccacccc
gactggcggaccaagcgggacggcgagaagcacgtcagggtcctcggcttcggaaaggtg
ctgtcccgggcccgcgagcagatcctggtcgacctcggcaccgaggggatgccgcacgca
cgggcctgcgcgaccgccgtacggctgctcgacctgggctacttccggatcggcaacgac
gtctacgccgaccagaacggcagcttcgggctcaccacgctgcagcgccggcacgtgcgc
cggcagggggacgcgctcgtcttctgcttcgagggcaagtccggcgtcgagcactccgtc
accatcgacgacccccacgccatcggggcgctggaggtgatgcgccggcgccgcggcggc
gaccagctgctcgcgtggaaggagggccgcagctggcgggacctgcactcgtcccacgtc
aacgactacctgcgcgaggccaccggtgaggactactcggcgaaggacttccggacctgg
cacgccacggtgctggcggccgcctcgctcgcggagtcggaggagccgggggagagcaag
gcctcgcgcaagcgggcggtctccgcggcgatgaaggaggtcgcggagttcctcggcaac
accccggccctggcgaagtcgtcgtacgtcgaccctcgcgtggtcgacgcctacgaggag
ggccgcacgatcgccgcgaccgcccgccggagccaccgcaccgcggacgagcgccaggcc
gcgctggagcgcgcggtgctccggctgctgcgatag
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