Nocardioides euryhalodurans: EXE57_11260
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Entry
EXE57_11260 CDS
T05931
Name
(GenBank) Fpg/Nei family DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
noy
Nocardioides euryhalodurans
Pathway
noy03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
noy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
EXE57_11260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
noy03400
]
EXE57_11260
Enzymes [BR:
noy01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
EXE57_11260
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
EXE57_11260
DNA repair and recombination proteins [BR:
noy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
EXE57_11260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Zn_ribbon_TFIIB
NFACT_N
DUF294_C
Ribosomal_S13
Zn_ribbon_RRN7
Motif
Other DBs
NCBI-ProteinID:
QBR92786
UniProt:
A0A4P7GL27
LinkDB
All DBs
Position
2349782..2350648
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AA seq
288 aa
AA seq
DB search
MPELPEVEALALDLKGRLTDRAIVKVHVAAFSALKTFDPPLQALEGAMVEDVTRHGKFLD
IDASGTHLVLHLARAGWVRWRDEVPELPPKPSNKSPLALRVVLDDQSGLDITEAGTKKSL
AAYVVRDPGDVRGIASLGPDPLVDEFTVEAFRKILTEAGRAQVKGVLRHQGTIAGIGNAY
SDEVLHAARMSPFKPASSLTEEESQTLYDAIRTVLGDAVDRSRGLHASELKGEKKSHLAV
HGQTGKPCPVCGDTVREVSFADSSLQYCPTCQTGGKPLADRRMSRLLK
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
gtgccggagctgcccgaggtggaggcgctggccctggacctgaagggccggctgaccgac
cgcgcgatcgtcaaggtccacgtggccgcgttcagcgccctcaagaccttcgacccgccg
ctgcaggcgctcgagggcgcgatggtcgaggacgtcacccgccacggcaagttcctcgac
atcgacgcctccggcacccacctcgtcctccacctcgcccgcgccggctgggtccggtgg
cgcgacgaggtcccggagctgccgcccaagccgtcgaacaagtcgccgctcgcgctccgg
gtcgtcctcgacgaccagagcggcctcgacatcaccgaggcaggcaccaagaagagcctc
gccgcgtacgtcgtccgcgaccccggcgacgtgcgcgggatcgcctcgctcggaccggac
ccgctcgtcgacgagttcaccgtcgaggcgttccgcaagatcctcaccgaggccggtcgc
gcccaggtcaagggcgtgctgcgccaccagggcaccatcgcggggatcggcaacgcctac
tccgacgaggtgctccacgccgcgcggatgtcgccgttcaagccggcctcctccctgacg
gaggaggagtcgcagacgctctacgacgcgatccgtacggtgctcggcgacgccgtcgac
cgctcgcgcgggctccacgccagcgagctgaagggcgagaagaagtcccatctcgccgtc
cacggccagaccggcaagccgtgcccggtgtgcggcgacaccgtgcgcgaggtcagcttc
gccgactccagcctccagtactgcccgacctgccagaccggcggcaagcccctcgccgac
cgccggatgtcccgactgctgaagtga
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