Nocardioides euryhalodurans: EXE57_11785
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Entry
EXE57_11785 CDS
T05931
Name
(GenBank) type IV secretion protein Rhs
Organism
noy
Nocardioides euryhalodurans
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
TEN_YD-shell
Motif
Other DBs
NCBI-ProteinID:
QBR92879
UniProt:
A0A4P7GLW9
LinkDB
All DBs
Position
2457830..2463193
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AA seq
1787 aa
AA seq
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MVDLGAIDEDVRFDHGAADTLASRCDAAADVIEGQAGSRASWKNTALTDFRGAFSELFRS
NASVAAADATELASRLREVATGVRLLKEEARKEQQRRETARQWKREQDDRNLWDKGVDAV
FGGDDPPVGPPAAEPTIPVSAPVNGTRETPTPGSGGGGGGGGTSSARPEDLRAFANGSRG
ANQTLSAKPAMCRSAYTTFEAGCGWGRLEASGVFTGFDKYLDANEEDVRWATLVADAFAA
AGGEGAVSTLSDSALLATLQAAGVDASRQDIVIDPPTAYGHPPTTGYSVDPVNTATGNFL
EREVDLSFTGATAALVWDRTYNSFSQQAGAFGPGWSSWTEAGLALDDEAARMTLPDGRVI
VFPRLGTGWDRATGENMWLARDDAGLQATTNDGKVLTFDGAGRLSALSHGAGTTVRLEHD
AGRLVRVVHERGRSVDLTWADERIVRATGSDGRTVDYAYDDSGRLVTAAGPAGLRSYAWD
DAGLISSVTDADGVVEAENAYDAHRRVTLQRTPHGRVVRFVYLPGNVTVVSDEDGTRSNT
WLHDQRGRLIGVVDTDERRQSTSYDAHGNPVMVTERDGSVTVHEYDDRGRRTRTVTPSGA
DLTYGYDEADRITTVVAESGGVVEYSYDGADRNPSLMVDPEGGRTRFSWRAGLLTEMVDP
VGVTVRFDYDDRGDLVATTDALGNTARLERDPTGRVTASVSPLGHRTRWTYLPHGHLGSR
QDPDGAVWRYEHTAAGRLSAVIDPTGSRTEIEHGSHGEETRTVDPLGRAVTRHLDDLGNL
ASVELPDGSRWEFTHDALSRLVAATDPAGAEWRYDYDANGDLTATTDPTGVRIGASVDRP
ARTLTVGDGEADRTWSFDPLGRATAATDPDGTSAVTVHDACGRPVELLDGDGGLTRIERD
AAGRAVAVTSPTGAVTRFEYDARGRLAALVDPTGARTTYEHDADGRLVREVLPTGEVAWT
EHDPCGRVTAASVPGRGVARYRYDAAGRVVESSDTWFGRRRFRYDAAGQLVEVVNGNGGV
TRFERDPRGRAVAVTDPLGHTTRRSYDQLDRPVSQTDALGRTTRAGYDAAGRLAFQESPT
GSRVEWTHDTAGRIASEVVDGRLVTSVEHDPRARTVRISDHTQEHRTTTHLLEWNRRDQL
VRHVRDDRATTWAYDADGNRTSLTTPDGRSTTFERDAAGRVSVVEHPLLGRAVLERDGSG
RLVRATADGTLQTWERLDGFVVAHVHTDAGGATRTEVTRDEDGRITGIDRAGERTTYAYD
LAHQLVESRLGGSVTRWSYDAAGRLVTESVDGAVRGHTHDPAGQLLATRGPDGLTTRHDY
DGCGRRVRTERPDGRVRELSWTATGWLSAVTERAGDDVERTELHVDATGQLAWVGDTELW
WDTASPRGRGLLQVGEVPLLPVGAVTGVGEDWIPAGWRTGRGEGTDPWQAGVSGGPGRPV
VPGLPAGLGIGAAGELIIGGVDPLEWLDARVYDPASRGFLSTDPLDPVIGAGWAGNPYSY
AGNDPLHALDPTGLRPATDADLQAYKDANNGWVSENWEYLVGGAMVIGGGIMIATGFGGP
VGMALVAAGADTIIQKATTGEVNWGQVAVSGGLGLVGGAGAAWATRASVNGTAALRTTML
VNGGVNAAGAEAAYVINNRGNLTWQGAVGAGAGGFVSGAIGGAAGPSGGTLATQLGQRST
SLTAHAATGGVNFFGGFSGSVVNQTINGQPVNYGQAALSGGVNTATGAVSSVTMPSGSGM
TTLNQTSYFGPRTVSGAFNLGGTNTQSMYLQGGAGAAQGATYDVFSD
NT seq
5364 nt
NT seq
+upstream
nt +downstream
nt
gtggttgacctcggtgcgatcgacgaggacgtccgcttcgaccacggggcggccgacacg
ctggcgagtcgctgcgacgccgcggccgacgtgatcgagggccaggccgggtcgcgggcg
tcgtggaagaacaccgcgctgaccgacttccggggcgcgttctccgagctgttccgctcc
aacgcctcggtcgccgccgccgacgccaccgagctggcctcccggctgcgggaggtcgcc
accggcgtacgcctgctcaaggaggaggcccgcaaggagcagcagcgccgcgagacggcg
cggcagtggaagcgggagcaggacgaccgcaacctgtgggacaagggtgtcgacgccgtg
ttcggtggcgacgacccgccggtcggtccgccggccgccgagcccacgatcccggtgtcg
gcgccggtcaacggcacccgcgagactcccacccccggctcgggcgggggtgggggcggc
ggcggcacctcctcggccaggcccgaggacctgcgggccttcgccaacggctcccgcggc
gccaaccagacgctgagcgccaagccggccatgtgccgctccgcctacaccaccttcgag
gccgggtgcggctggggccggctcgaggcctccggcgtcttcaccggtttcgacaagtac
ctcgacgccaacgaggaggacgtgcgctgggcgacgctcgtcgccgacgcgttcgccgcc
gcgggcggggagggtgcggtctcgaccctgtccgactccgcgctgctggccaccctccag
gccgccggcgtcgacgcctcgcgccaggacatcgtcatcgacccgccgaccgcctacggc
caccccccgaccacgggctacagcgtcgacccggtcaacaccgcgaccggcaacttcctc
gagcgcgaggtcgacctgtccttcacgggcgccaccgcggccctggtctgggaccgcacc
tacaactccttcagccagcaggccggcgccttcggcccgggctggtcctcgtggaccgag
gccggcctcgcgctggacgacgaggccgcccggatgacgctgcccgacggtcgcgtcatc
gtcttcccgcggctcggcaccggctgggaccgcgccaccggggagaacatgtggctggcg
cgcgacgacgccgggctgcaggcgaccaccaacgacgggaaggtgctgaccttcgacgga
gccgggcggctctcggcgctctcccacggagccggcaccaccgtccggctcgagcacgac
gccggtcgcctggtgcgggtcgtccacgagcgcggtcgctccgtcgacctcacgtgggcc
gacgagcggatcgtgcgggccaccggctccgacggccgcaccgtcgactacgcctacgac
gactccgggcgcctggtcacggcggccgggccggcgggcctccgttcctacgcgtgggac
gacgccggcctgatctcctcggtcaccgacgccgacggggtggtcgaggccgagaacgcc
tacgacgcccaccgacgggtgacgctccagcgcacgccccatggtcgggtggtgcggttc
gtctacctgcccggcaacgtcacggtcgtctccgacgaggacggcacccgctccaacacc
tggctccacgaccagcgcggccggctgatcggcgtcgtcgacaccgacgagcgccgccag
tccaccagctacgacgcccacggcaacccggtcatggtgaccgagcgcgacggctcggtg
accgtgcacgagtacgacgaccgcggccggcgtacgcgcaccgtgaccccgtccggcgcc
gacctcacctacggctacgacgaggccgaccggatcaccacggtcgtcgccgagtcaggc
ggcgtcgtcgagtactcctacgacggcgcggaccggaacccctcgctgatggtcgacccg
gagggcggccggacccggttcagctggcgggccggcctgctcaccgagatggtcgacccg
gtcggcgtcaccgtccggttcgactacgacgaccggggcgacctggtggccaccaccgat
gccctgggcaacaccgcccggctcgagcgcgaccccacaggtcgcgtcacggcctcggtg
tcgccgctgggtcaccgcacccgctggacctacctgccccacgggcacctcgggtcgcgt
caggacccggacggcgccgtgtggcgctacgagcacaccgccgcgggccggctctcggcc
gtgatcgacccgaccggctcccgcaccgagatcgagcacgggtcccacggcgaggagacc
cggaccgtcgacccgctgggtcgtgccgtcacccgccacctcgacgacctcggcaacctc
gcctcggtcgagctgcccgacggcagccgctgggagttcacccacgacgcactgtcgcgg
ctggtggccgcgaccgatcctgccggcgcggagtggcgctacgactacgacgccaacggc
gacctgaccgcgaccacggaccccaccggcgtccggatcggtgcctccgtggaccggccg
gctcgcacgctcacggtcggggacggcgaggcggaccggacctggtccttcgacccgctc
ggtcgcgccaccgccgccaccgaccccgacggcacttccgccgtcaccgtccacgacgcc
tgcggtcgtcccgtcgagctgctcgacggtgacgggggcctgaccaggatcgagcgcgac
gccgcagggcgtgctgtcgccgtcacctcgcccaccggcgccgtcacccgcttcgagtac
gacgcccgaggtcggctggccgccctcgtcgacccgaccggggcccggaccacgtacgag
cacgacgcggacggacggctggtccgcgaggtgctgccgaccggtgaggtcgcctggacc
gagcacgacccctgcggccgggtcaccgccgcctccgtcccgggtcgcggcgtggctcgc
taccgctacgacgccgcgggccgggtcgtggagtccagcgacacctggttcggacgccgc
cggttccgctacgacgcagccggtcagctggtcgaggtcgtcaacggcaacggcggcgtc
acccgtttcgagcgcgacccccgcggtcgcgccgtggcggtcaccgacccgctgggccac
accacgcgccggagctacgaccagctggaccgacccgtctcccagaccgacgcgctgggc
cgcacgacccgcgccggctacgacgccgccggtcgcctcgccttccaggagagcccgacg
ggctcccgggtggagtggacccacgacaccgccggccggatcgcctcggaggtcgtcgac
ggccgactcgtgacctcggtcgagcacgacccccgcgcgcgcacggtccggatctccgac
cacacccaggagcaccgcaccaccacccacctcctggagtggaaccgtcgcgaccagctg
gtgcggcacgtgcgcgacgaccgggcgaccacgtgggcctacgacgccgacgggaaccgg
acctcgctgacgacgccggacggccgcagcaccaccttcgagcgcgacgccgccggccgc
gtgtccgtcgtcgagcacccgctcctcggccgggccgtgctggagcgggacgggtccgga
cgcctggtccgggccaccgccgacggcacgctgcagacctgggagcgcctcgacggcttc
gtcgtggcccacgtgcacaccgatgccggtggcgccacccgcaccgaggtcacccgtgac
gaggacggcaggatcaccggcatcgacagggcaggcgagcggacgacgtacgcctacgac
ctggcccaccagctggtggagtcccggctgggcggctcggtcacccgctggtcctacgac
gccgcggggcgtctggtcacggagtccgtcgacggcgctgtccgggggcacacccacgac
ccggccggccagctgctggcgacccgggggccggacggcctcaccacgcggcacgactac
gacggctgcggccgacgggtccggaccgagcgccccgacggccgcgtccgcgagctctcg
tggacggccacgggctggctctcggcggtcaccgagcgcgccggcgacgacgtcgagcgc
accgagctccacgtcgacgccaccggtcagctggcgtgggtcggcgacaccgagctctgg
tgggacacggcctcaccccgcggccggggcctgctgcaggtgggtgaggttccgctcctg
ccggtcggcgccgtcaccggcgtcggcgaggactggatccctgccggctggcgcaccggt
cgcggcgagggcaccgacccgtggcaggccggggtctccggcggcccgggacgacccgtg
gtgccgggcctgccggccgggctcgggatcggggcggccggcgagctgatcatcggcggc
gtcgacccgctggagtggctggacgcccgggtctacgacccggccagccgcggcttcctc
tccaccgacccgctcgacccggtcatcggggccggctgggccggcaacccctactcctac
gccggcaacgacccgctccacgccctcgaccccaccggcctgcggcccgccaccgacgcg
gacctccaggcctacaaggacgccaacaacggctgggtcagcgagaactgggagtacctc
gtcggcggggcgatggtgatcggcggcggcatcatgatcgccaccggcttcggcggtccg
gtcggcatggccctggtggccgccggtgccgacacgatcatccagaaggccacgaccggc
gaggtgaactgggggcaggtcgccgtctcgggcgggctcgggctcgtgggtggagccggg
gctgcgtgggccacccgcgccagcgtcaacggcacggccgcgctgcgcaccaccatgctc
gtcaacggcggcgtcaacgcggccggggccgaggcggcgtacgtcatcaacaaccggggc
aacctgacctggcagggcgccgtcggcgccggggccggcggcttcgtctccggggcgatc
ggcggcgcggcaggtccgtccggcggcacgctggccacccagctggggcagcgctcgacc
agcctgaccgcccacgcggccacgggcggcgtgaacttcttcggcgggttcagcggatcc
gtcgtcaaccagacgatcaacggtcagcccgtgaactacggtcaggctgcgctgtccggc
ggcgtcaacaccgcgaccggagcggtctcgtcggtgacgatgccctcgggttcgggcatg
accaccctcaaccagacctcctacttcggtccgcgcacggtcagcggcgccttcaacctc
ggcggcaccaacacccagtcgatgtacctccagggcggggcgggcgcggcgcagggggcc
acgtacgacgtcttcagcgactag
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