Nocardia sp. CS682: DMB37_07160
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Entry
DMB37_07160 CDS
T06040
Name
(GenBank) B/F/G family RNA polymerase sigma-70 factor
KO
K03090
RNA polymerase sigma-B factor
Organism
noz
Nocardia sp. CS682
Brite
KEGG Orthology (KO) [BR:
noz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
noz03021
]
DMB37_07160
Transcription machinery [BR:
noz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
DMB37_07160
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
MarR_2
MarR
KORA
HTH_Tnp_ISL3
HTH_3
GerE
HTH_Crp_2
Sigma70_ECF
HTH_24
DUF7343
DUF134
E3_binding
Motif
Other DBs
NCBI-ProteinID:
QBS39946
LinkDB
All DBs
Position
1654863..1655798
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AA seq
311 aa
AA seq
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MADEDTVFDSDRDDNADTVTDKPDPATEKADDAESAAEDADDVSTEDAVEESETIEAVRT
VAGYDDVGLLFEQLGASKPGTARHSAIRAELISRCIPLADHIARKFSGRGEPFDDLTQVA
RVGLVHAVDRFDVERGSNFLSFAVPTIMGEVRRYFRDNTWAMRVPRRVKETHLRIGAAID
ALSQRLGRSPTAKEIAAELDVDPDEVTQAVIAGNAYQPSSIDAATLGRDTDASLLDTLGE
EESQFDRVEEYVAIRPLLAGLPERERRILTMRFFESMTQTQIAQQMGISQMHVSRILAKT
LARLREQSSRE
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
gtggcggacgaggacaccgtgttcgactccgatcgcgacgacaacgccgacaccgttacc
gacaagccggatcccgccaccgagaaggccgacgacgcggagagcgccgccgaggacgcg
gacgatgtcagcaccgaggatgccgtcgaggaaagcgaaaccatcgaagcggtacggacg
gtcgccggctacgacgacgtcgggctgctcttcgaacagctcggtgcgagcaagccggga
accgcacggcacagcgcgatccgggccgaactgatcagtcgctgcatcccgctcgccgat
cacatcgcgcgcaagttcagcgggcgcggtgaaccgttcgacgacctcacccaggtggcg
cgggtcggtttggtgcacgccgtcgaccggttcgacgtcgagcgtggctcgaacttcttg
tccttcgcggtgccgacgatcatgggcgaggtgcgtcgttacttccgcgacaacacctgg
gccatgcgcgtgccgcggcgggtcaaggagacgcatctgcggatcggcgcggcgatcgac
gcgctctcccagcggctcggccggtcaccgacggccaaggagatcgccgccgaactcgac
gtggacccggacgaggtgacccaggccgtcatcgcgggcaacgcctaccagccgagctcc
atcgacgcggccaccctcggccgcgacaccgatgcctccctgctggacaccctcggtgag
gaagagtcccaattcgaccgggtggaggagtacgtcgcgatccgtccgctgctggccggg
ctgcccgagcgggaacgccggatcctcaccatgcggttcttcgaatcgatgacgcagacc
cagatcgcccagcagatgggcatctcgcagatgcacgtctcgcgcatcctcgcgaaaacc
cttgcgcggcttcgggagcagtcgagccgggagtaa
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