Nocardia sp. CS682: DMB37_08215
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Entry
DMB37_08215 CDS
T06040
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
noz
Nocardia sp. CS682
Brite
KEGG Orthology (KO) [BR:
noz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
noz03016
]
DMB37_08215
Enzymes [BR:
noz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
DMB37_08215
Transfer RNA biogenesis [BR:
noz03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
DMB37_08215
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
QBS40114
UniProt:
A0A4P7H0G5
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All DBs
Position
1874463..1875755
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AA seq
430 aa
AA seq
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MSVPDESEPTGAPPLLAPVDGVPPVLDTAAEIAAAAARLAAGTGPLAVDAERASGFRYSA
RAYLIQLRREGAGTFLIDPIPVADSLGPLADAINDLEWVLHSADQDLPGLAELGLRPKRL
FDTELGGRLAGFERVGLAAMVENLLGHALRKGHGAADWSTRPLPAEWLNYAALDVELLLE
LRDAVAAELEAQGKTDWAAQEFEHVRTTEPAPPKADRWRRTSGIHNLRRTRQLAVVRELW
TTRDALARGRDVAPARILPDAAIIAAVTADPKTIAQLRALPVFGGPRQRRYSREWLAAID
RGRTMPDSDLPPLTQPFDGPPPVNRWERRDPAAAARLTRARTAMGELSTEHAIPVENLLS
PDLVRRLCWDGLPDYDHIPDSPDDLAAAIDGFLKSGGARPWQRELAVPGLTEALTPKPAE
QVTPPPPASA
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtacccgacgaatccgaacccaccggcgcgccacccctgctcgcgcccgtggat
ggcgtgcctccggtactggacaccgccgctgaaatcgccgcggccgccgcgcgtctcgcc
gcgggcaccggcccgctcgccgtcgatgccgaacgtgcctcgggtttccggtattcggcg
cgcgcctacctgattcagctgcgccgcgagggtgcgggaacgttcctcatcgatccgatt
ccggtcgccgactcgctcgggccgctggccgacgcgatcaacgacctcgagtgggtattg
cactcggcggaccaggatctgcccggtctcgccgaactcggcctgcgcccgaagcggctg
ttcgataccgaattgggcggtcggctggccggtttcgaacgcgtcggcctggccgcgatg
gtggagaacctgctgggtcacgcgctgcgcaaggggcacggcgcggccgactggtcgacc
aggccactgccggccgaatggctgaactacgcggccctggatgtcgaactgctgctggag
ttgcgcgacgcggtcgccgcggagctggaagcgcaaggcaaaaccgattgggcagcacag
gaattcgagcacgtccggaccaccgaaccggcgccgccgaaagcggaccggtggcggcgc
acctcgggcatccacaacctgcgccggacccgacagctcgccgtggtgcgcgagctatgg
accacccgggacgcgctcgcccgcggccgcgacgtagcccccgcccggatcctgcccgac
gccgcgatcatcgcggccgtcaccgccgacccgaaaaccatcgcgcaactgcgcgcattg
ccggtgttcggcggcccgcggcagcggcgctactcccgcgagtggctggccgccatcgac
cgcggccggaccatgccggacagtgacctaccgccgctgacccagccgttcgacggcccg
cccccggtcaaccgctgggaacgccgcgatccggccgccgccgcccggttgacccgcgcg
cgcaccgcgatgggtgagctgtccaccgagcacgcgatcccggtggagaacctgctctcc
cccgacctcgtccgccgcctgtgctgggacggactgcccgattacgaccacataccggac
tcccccgacgacctggccgccgccatcgacgggttcctcaagtccggcggtgccaggccg
tggcagcgcgaactggccgtccccggcctgaccgaggcgctgacgccgaaacccgccgag
caggtcacaccgccgcctcctgcgtctgcttga
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