Nocardia sp. CS682: DMB37_12240
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Entry
DMB37_12240 CDS
T06040
Name
(GenBank) AMP-dependent synthetase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
noz
Nocardia sp. CS682
Pathway
noz00061
Fatty acid biosynthesis
noz00071
Fatty acid degradation
noz01100
Metabolic pathways
noz01212
Fatty acid metabolism
noz02024
Quorum sensing
noz04146
Peroxisome
Module
noz_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
noz00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
DMB37_12240
00071 Fatty acid degradation
DMB37_12240
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
DMB37_12240
09145 Cellular community - prokaryotes
02024 Quorum sensing
DMB37_12240
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
noz01004
]
DMB37_12240
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
noz04147
]
DMB37_12240
Enzymes [BR:
noz01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
DMB37_12240
Lipid biosynthesis proteins [BR:
noz01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
DMB37_12240
Exosome [BR:
noz04147
]
Exosomal proteins
Exosomal proteins of breast milk
DMB37_12240
Exosomal proteins of breast cancer cells
DMB37_12240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
FlbD
TMEM151
Motif
Other DBs
NCBI-ProteinID:
QBS40769
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All DBs
Position
2729936..2731423
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AA seq
495 aa
AA seq
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MDSVINQIVATPPPAGYHATFARLGKTESIELRELAAGAERLAVRLRELGVGQGDRIGIL
AANCLEWVLLDLAALRCKAVTAGLEPGKFEPDAALLARYDLKLLFTDQPSTAAGVRPISE
ARVLAEQPADPLPEVRYDSEEATTLKFTSGSTGVPKGLAASVGSIDSSLRAVQAMFAHGP
GDHLFVFLPLALLQQRYWIYSALCFGHDVTVSTYEAAFTAMRQVRPTVVMGVPGFYETVK
RHLAAQTDPQVAAKEMFGDRIRYLWTGSAPAGPDMLRFFTNLGLPIYEGYGMNETCIVAK
NYPGASKEGSVGRVVPGKEVLFDADGVISVRSDFPVARRYEYGATAHSMGAFAADGTVRT
GDLGYLDDDGFLYIQGRADDVIVLANGKKVIVRPIEERMAASAAIEHCVLFCPTQTQLVA
VVSPTSEPADEAAITEHLERTNAALERDERIARVVIAQPRFSIENGLLSSQYKPKRRQIL
EQYRREIGEKGRTHA
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atggattcggtgatcaaccagatcgtcgcgacgccgcccccggccggctaccacgccacc
ttcgcgcggctgggcaagacggaatccatcgaactgcgtgagctggctgccggtgccgaa
cgcctggcggttcggctccgcgaattgggtgtggggcaaggggatcggatcggcatcctc
gctgcgaactgcctggagtgggtgctgctcgatctggccgcgctgcggtgcaaagcggtg
accgcggggctcgagcccggcaagttcgagcccgacgcggcgctgctcgcccgctacgac
ctgaagctgctgttcaccgatcagccgtccaccgccgccggtgtccggccgatcagcgag
gcgcgcgtgctcgccgaacaaccggccgaccccctgcccgaggtccggtacgacagcgaa
gaggcgaccaccctcaagttcacctcgggcagcaccggcgtgccgaagggcttggcggcc
agcgtcggcagcatcgacagctcactgcgcgccgtccaggcaatgttcgcgcacggcccc
ggcgaccacctgttcgtcttcctgccgctggccctgttgcagcagcggtactggatctac
tcggcgctgtgtttcggccacgacgtcacggtcagcacctacgaggcggcgttcacggca
atgcgacaggtgcggcccaccgtagtgatgggagtgccgggcttctacgagaccgtgaaa
cggcatctggcggcacagaccgatccgcaggtggcggccaaggagatgttcggcgaccga
atccggtacctgtggaccggttccgcgccggccggcccggacatgctgcgtttcttcacg
aacctgggcctgcccatctacgagggctacggcatgaacgagacctgcattgtcgccaag
aattatccgggcgcgagcaaggaaggcagcgtcggacgcgtggtgcccggcaaggaggtg
ctgttcgacgccgacggcgtcatcagtgtgcgcagcgacttcccggtggcacggcggtac
gagtacggcgcgaccgcgcattcgatgggcgcgttcgccgcggatggcacggtccggacc
ggcgatctcggttacctggacgacgacggctttctgtacatccagggtcgcgccgacgac
gtcatcgtgttggcgaacggcaagaaggtcatcgtccggccgatcgaggaacgcatggcc
gcgagtgcggcgatcgagcactgcgtgctgttctgtccgacgcagacccaactcgtcgcg
gtcgtctcgccgaccagcgaacccgccgacgaagcggcgatcaccgaacacctcgagcgc
accaacgcagcgctggagcgcgatgagcgcatcgccagggtggtgatcgcgcaacctcgg
ttcagcatcgaaaacgggctgctcagttcgcaatacaaaccgaaacgtcggcagatcctc
gagcagtatcgacgggaaatcggcgagaaaggaagaacacatgcctga
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