Nocardia sp. CS682: DMB37_12880
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Entry
DMB37_12880 CDS
T06040
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
noz
Nocardia sp. CS682
Pathway
noz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
noz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DMB37_12880 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
noz03019
]
DMB37_12880 (recQ)
03400 DNA repair and recombination proteins [BR:
noz03400
]
DMB37_12880 (recQ)
Enzymes [BR:
noz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DMB37_12880 (recQ)
Messenger RNA biogenesis [BR:
noz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DMB37_12880 (recQ)
DNA repair and recombination proteins [BR:
noz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DMB37_12880 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
RecQ_Zn_bind
Helicase_C
Motif
Other DBs
NCBI-ProteinID:
QBS45802
UniProt:
A0A4P7HE97
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All DBs
Position
complement(2854747..2856627)
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AA seq
626 aa
AA seq
DB search
MTLPDAFAAAATDTDPGVDAGSGAAQEVLRRVFGYDSFRGDQRDIVEHVVAGGDALVLMP
TGGGKSLCYQVPALVRPGVGVVISPLIALMQNQVDALSALGVRAGFLNSTQFPDERRAVE
AQFVAGELDLLYLAPERLRLESTAQLFDRGKVGLFAIDEAHCVSQWGHDFRPDYLALSML
HERWPDVPRIALTATATAKTSDEIVQRLDLGNARRFVASFDRPNIQYRIEPKNKPDRQLL
DFIRTEHAGDAGIVYCLSRNSVEKTAAFLTENGVSAVPYHAGLDNRTRAENQTRFLREDG
LVVVATIAFGMGIDKPDVRFVAHLDLPKSVEGYYQETGRAGRDGQPSTAWMVYGLNDVVQ
QRKMIDSSEGDAAHRRQLQLHLDAMLALCETVSCRRVQLLNYFGQHEQQPCGNCDTCLTP
AESWDGTVPAQKLLSTVLRLKRERGQSFGAGHIVDILLGKKNPKVLQHDHHELKVFGIGT
DLRDIEWRGVVRQLLAGGLLAVHGDYGVLTLTDASNEVLFEGRQVLLRRERERPMKPARA
AKAGKAAAAAEMAPADVPVFEKLREWRAATAKEQGVPAYVVFHDATLREIAARKPTSLAE
LGTVTGVGENKLAKYGEGVLEVLGAE
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
gtgactctccccgatgcattcgcggccgcggcgaccgacaccgatcccggtgtggacgcc
ggatccggtgcggcgcaagaggttctacgccgagtcttcggctacgacagcttccgcggc
gaccagcgcgacatcgtggagcacgtggtcgcgggcggtgatgcgctggtgctcatgccg
accggcggcggtaagtcgctctgctatcaggtgcccgcgctggtccggcccggcgtcggc
gtggtgatctcaccgctgatcgcgctgatgcagaaccaggtggacgcgctcagcgcgctc
ggtgtgcgcgccggattcttgaattcgacccagttcccggacgagcgccgggccgtggag
gcgcagttcgtggcgggggagttggacctgctgtacctggcgcccgagcggctgcggctg
gaatcgacggcacagctgttcgatcgcggcaaggtggggctgttcgccatcgacgaggcg
cactgtgtctcgcagtggggccacgatttccgccccgactatctggcgctgtcgatgctg
cacgaacgctggcccgacgtgccgcgcatcgcgttgaccgcgaccgccaccgcgaagacc
agcgacgagatcgtgcaacgcctcgacctcggcaacgcccgccgcttcgtcgcgagcttc
gatcgacccaatatccagtaccggatcgagccgaagaacaagcccgatcggcagctgctc
gatttcatccgcaccgagcacgcaggcgacgcgggcatcgtgtactgcctgtcccgcaat
tcggtggagaagaccgcggcgttcctcaccgagaacggtgtcagcgcggtgccgtatcac
gcgggcttggacaaccgcacccgcgcggagaaccagacgcggttcctccgcgaggacggt
ctggttgtcgtggcgaccatcgccttcggcatgggcatcgacaagccggacgtgcgtttc
gtcgcacacctcgatctgccgaagtccgtggagggctactaccaggagaccggccgggcg
ggccgcgacgggcagccctccaccgcgtggatggtgtatggcctgaacgacgttgtgcag
caacggaagatgatcgactcctcggagggtgacgccgcccaccgccgccagttgcagctg
cacctggacgccatgctggcgctgtgcgagacggtgtcgtgccgccgggtgcagttgctc
aactacttcggtcagcacgagcagcagccgtgcggcaattgcgatacctgcctcaccccg
gccgaatcctgggacggcaccgtccccgcgcagaagctgctgtcgacggtgctgcggctg
aaacgcgaacgcggccagagcttcggtgccggccacatcgtcgacatcctgctcggcaag
aagaatcccaaggtgctgcagcacgatcaccatgagctgaaggtcttcggcatcggcacc
gatctgcgcgatatcgaatggcgcggtgtggtgcggcaattgctggcgggtgggttgctc
gccgtgcacggtgactacggcgtgctgacgctcaccgacgcgagcaacgaggtgctcttc
gagggccgccaggtgctgttgcgccgcgagcgcgaacggccgatgaaaccggcgcgggcc
gccaaggcgggcaaggccgcggccgccgccgagatggcacccgcggatgttccggtgttc
gagaagctgcgcgaatggcgggccgcgaccgccaaggaacagggcgttcccgcctacgtc
gtcttccacgacgcgaccctgcgcgagatcgccgcccgcaagccgacgagcctggccgag
ctcggcacggtcaccggcgtcggtgagaacaagctcgccaagtacggcgaaggagtgctg
gaggtattgggcgcagagtga
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