Nocardia sp. CS682: DMB37_14830
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Entry
DMB37_14830 CDS
T06040
Name
(GenBank) double-stranded DNA exonuclease
KO
K03546
DNA repair protein SbcC/Rad50
Organism
noz
Nocardia sp. CS682
Brite
KEGG Orthology (KO) [BR:
noz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
noz03400
]
DMB37_14830
DNA repair and recombination proteins [BR:
noz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DMB37_14830
Archaeal homologous recombinant proteins
DMB37_14830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_27
AAA_29
SMC_N
ABC_tran
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QBS41200
LinkDB
All DBs
Position
complement(3276512..3279925)
Genome browser
AA seq
1137 aa
AA seq
DB search
MRLHRLEMTAFGPFAETTVVDFDALGADGLFLLHGQTGAGKTTVLDAIAFALYGRVPGAR
GESKRLHSDHAPDQTPPQVILEATLGGRRVRLTRIPEFERPKLRGTGMRTDPAKATLAWL
DGRGENLSRIPDIGEEIIRLLGMSADQFFQVVLLPQGDFARFLRADNEDREKLLEKLFDT
ERFGSAEQWLADKRRASAADLDTRKQGIDRLIAQLGVAGGTSAAETLGPLEAVGWSQDLL
ATARTDLTTAAAAAERCQQESARVRGVAEEQRRLHELRRRMSTARKQLEDYAAAAEQRAA
LQAELELARRAEPVAAAIDEARDAVMAMRRRAAEARSASKQLAARLLEPGAVDLGGAELV
EYADADASVGADRSTRANHHGAGTDRVGEAESATAPGQAVIKDDADIDGAIRRWSAQIGA
LDEVRVDATTADRLTRELAGLRDQDAALNTQVTKLTRLREQLPGSLATLEARLREATTAA
ATLPTLTAECERLQTAAAAAVELASRKTALDHARVEFESARAAHNDAKERVLDLRERRLA
GMAAELAAGLTDGLPCTVCGSADHPAPARPTAGAVAKEAEEAAVAAERAAEDARDRIFAR
ISALEREIEALTARGGDVDRVELAAALRAATDRYEDTAELAALADGLTAELARLRTDEAR
LHDELRDSDSRRSTVAANVATVTIRLTELNDRLRAAAGADETIDRRYARLTALVADATAL
RDARAAAAAAREQVAVIADRVENLARAAGFVPEQENAARPGVAGSGAAGADIAGVGAAAA
DVSGAGVAGVAGAAGDSVAGVSSAGGATADAADADDVAGARAVGADNASRSAYVAQGVSA
AVPRDEVARLTAYARVVNAASRTPQRQSAIEAELTSADRARAHAEAVLAEPEVQAAASIE
PGDLTELEAAVAAAQTQLNVAVAAHAEATRRVALLEDLGGQLWAAVDRIAPLQRTHDELA
GLAEVVAGRGENNRRMSLRSYVLAARLEEVAQAGSLRLRRMSGGRYEFVHTDKAGPRGRR
GGLGLDIRDDYTGAIRPAKTLSGGETFMASLSLALGLADTVAAESGGLVLDTLFIDEGFG
GLDADTLDAVMGVLDELRAGGRVVGVVSHVDEMRQRIPSRLHVRRGRNGSRLEATVA
NT seq
3414 nt
NT seq
+upstream
nt +downstream
nt
atgaggctgcaccggctggagatgaccgcgttcggcccgttcgccgaaaccacggtcgtc
gacttcgacgcgctcggcgccgacggactcttcctgctgcacgggcagaccggcgcgggg
aagaccaccgtgctcgacgcgatcgccttcgcgctctacggccgggtccccggcgcccgc
ggcgagagcaaacgcctgcactccgaccacgcaccggatcagacaccgccgcaggtgatc
ctggaggccaccctcggcggccgacgggtgcgtctgacccgcatccccgagttcgaacgc
ccgaagctacgcggcaccggcatgcgcaccgaccccgccaaggcgacgctggcctggctg
gacgggcgcggcgaaaacctttcccggataccggatatcggcgaggagatcatccggctg
ctcggcatgagtgccgaccagttcttccaggtggtgctgctgccgcagggcgacttcgcg
cggttcctgcgggcggacaacgaggatcgcgagaagctgctcgaaaagctcttcgacacc
gaacgattcggcagcgccgaacagtggctcgcggacaaacgccgtgcctccgccgccgac
ctcgatacgcgcaagcaaggcatcgaccggttgatcgcacagctcggtgtcgcgggtggc
accagcgcggccgagacgctcggcccgctggaggccgtcggctggtcacaggacctgctc
gccacggcgcgcactgatctgaccaccgcggccgcggcagccgaacgctgccaacaggag
tcggcgcgggtgcggggagttgccgaggagcagcgccgcctgcacgagctacggcgtcga
atgtccaccgcccgtaagcagctcgaagactatgccgccgcagcggagcagcgcgccgct
ctgcaggccgaactcgaactcgcgcggcgtgccgaaccggtcgcggcagccatcgacgag
gcacgcgacgcggtcatggcgatgcgccgccgggcggccgaggcgcgcagcgccagtaag
caattggccgcacggctgctcgaacccggtgccgtcgatctcggtggcgcggaactggtc
gagtacgccgatgccgacgcgagtgtgggcgccgatcggtcgacccgtgcgaatcaccat
ggcgccgggacggatcgggtaggggaggccgagtctgcgaccgccccaggccaggccgtc
atcaaggacgacgccgacatcgatggcgcgattcgccgctggagtgcgcagatcggcgca
ctggacgaggtgcgcgtcgacgcgacgacggccgatcggctcaccagggagctggcgggg
ctacgtgaccaagatgcggcactcaacacccaggtgaccaaactgacccggctgcgtgag
cagctccccggctccctcgccaccctcgaggcgcgcctgcgcgaggcgaccaccgcggcc
gcgacgctgccgaccttgaccgcggaatgcgagcgtctacagacggccgccgccgctgcg
gtcgaactcgcttctcgcaaaacagctctggatcacgcacgggtcgagttcgagtcggcc
cgcgccgcgcacaacgatgccaaggagcgcgtcctcgacctgcgcgaacgcaggctggca
ggcatggccgccgaattggcggccgggctgaccgacggtctgccctgcacggtgtgtggt
tccgccgatcaccccgcgcccgctcgacccaccgcgggcgcggtcgccaaggaggccgag
gaggcggcggtcgcggccgaacgcgccgctgaggacgcccgggaccgaattttcgcccga
atcagcgccttggagcgggagatcgaggcactcactgcccgcggcggcgacgtcgaccgc
gtggagttggccgccgcgttgcgtgcggccaccgatcgctacgaggacaccgccgagctg
gctgccctcgccgacggcctgaccgcggaactcgcccggctgcgcaccgacgaggcccgc
ctgcacgacgaactccgcgactccgattcgcgccgcagcaccgtcgccgcgaatgtcgcc
accgtgacaatccgtctcaccgaactcaacgaccgccttcgcgccgccgcgggcgcggac
gagaccatcgaccgccgctacgcccggctcaccgccctcgtcgccgacgctaccgccctg
cgtgacgcgcgcgccgccgccgcagcagcccgcgagcaggtcgccgtgatcgccgaccgc
gtcgaaaacctggcccgtgcagccggtttcgtacccgagcaggagaatgcggcccggccc
ggcgttgcagggtccggcgctgccggagccgacatagctggagtcggcgctgcagccgca
gatgtttctggcgccggagtcgctggggtcgcaggcgctgcaggggacagtgttgctggg
gtcagcagtgccgggggcgcaaccgcagacgctgctgacgccgacgacgtcgcaggggcc
cgcgctgtaggcgccgacaatgcttcgcggagtgcctatgttgcgcagggagtttcggcc
gcagtcccacgagatgaggtagcgcgactgaccgcgtacgcgcgagtggtcaacgcggcc
agccggactccgcaacggcagtctgcgatcgaagctgaactcacgtccgccgaccgtgcc
cgcgcgcacgcggaagccgtgctcgccgaaccggaagtccaggcggcggcatcgatcgaa
cccggcgacctgaccgagctcgaagccgccgtcgcggcagcgcagacccagctgaatgtc
gctgtcgccgcgcacgccgaggcgaccaggcgagtcgccctgctcgaagatctcggcggc
cagctgtgggcagcggtggaccggatcgcgccactccagcgcacgcacgacgaactggcc
gggctcgccgaagtggtggccggtcgcggcgagaacaatcgccggatgtcgctgcgctct
tacgttctcgccgcccgactggaagaagtggcgcaggccggttcgctgcgcctgcgtcga
atgtccggcggccgttacgaattcgtgcacaccgacaaggcaggaccgcgcggccgccgc
ggcggtctcggcctggacatccgagatgactacaccggcgcgatccggcccgccaaaacc
ctttccggcggcgaaaccttcatggcgtcactgtctttggcgctcggcctcgccgacacc
gtcgccgccgaatccggcggcctggtgctggacaccctcttcatcgacgagggcttcggc
ggactcgacgccgacaccctcgacgccgtgatgggcgttctcgacgaactccgcgcgggc
ggccgcgtggtcggcgtggtcagccacgtcgacgagatgcgccagcgcatccccagccgc
ctgcatgtacgtcgcggccgcaacggttcccggctcgaggcaaccgtcgcctga
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