Nocardia sp. CS682: DMB37_26275
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Entry
DMB37_26275 CDS
T06040
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
noz
Nocardia sp. CS682
Pathway
noz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
noz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DMB37_26275 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
noz03400
]
DMB37_26275 (xth)
Enzymes [BR:
noz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
DMB37_26275 (xth)
DNA repair and recombination proteins [BR:
noz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
DMB37_26275 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
DUF6207
Motif
Other DBs
NCBI-ProteinID:
QBS43086
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All DBs
Position
5833023..5833802
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AA seq
259 aa
AA seq
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MAYIISTVNVNGVRAAAGKGMLAWLAATEADIVCVQETRATDEQTSAALAPALAEGWCLA
HAEPESKGRAGVAILSRRAPDAVRIGFGSSEFGASGRYLEADFGDVTVASVYVHSGDAGT
PRQDEKYRYLAELGAYLTERTGDFVVSGDWNIAHTERDLKNWKGNLKSAGFLPEERAWID
ELLAAGYVDVVRKLHPDVDGPYSWWSYRGRAFDNDTGWRIDYQLARGDLAARAKQAVVDR
AAAYDQRWSDHAPVTVQYR
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
gtggcctacatcatttcgactgtgaacgtaaatggcgtccgcgcggccgcgggcaaaggc
atgctggcctggctcgccgccacggaggccgacatcgtctgtgtccaggagacaagggcc
accgacgagcagaccagcgcggcgctggcgcccgcgctggccgagggctggtgcctggcg
catgcggagccggagtccaagggcagagcaggcgtcgcgatcctgtcccgacgggcaccg
gacgcggtccgaatcggcttcggcagcagcgagttcggcgcatccgggcgctacctggag
gcggacttcggtgacgtcaccgtcgcgagtgtgtacgtgcactccggtgacgcgggtacg
ccgcgccaggacgaaaagtaccggtacctggccgaactcggcgcctacctcaccgaacgc
accggtgacttcgtggtgagcggcgactggaacatcgcgcacaccgagcgggacctgaag
aattggaaaggcaacttgaagtccgccggtttcctgccggaggagcgggcctggatcgat
gagttgctcgcggcgggctacgtcgacgtggtgcgcaagctgcatccagacgtcgacggc
ccatacagctggtggtcctatcgcggccgcgccttcgacaacgacaccggctggcgcatc
gactaccaactcgcccgcggcgacctcgccgcgcgcgccaaacaggccgtggtggaccgc
gccgccgcctacgaccagcgctggtccgaccatgcgccggtcacggtgcagtaccgatga
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