Nocardia sp. CS682: DMB37_31085
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Entry
DMB37_31085 CDS
T06040
Name
(GenBank) B/F/G family RNA polymerase sigma-70 factor
KO
K03090
RNA polymerase sigma-B factor
Organism
noz
Nocardia sp. CS682
Brite
KEGG Orthology (KO) [BR:
noz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
noz03021
]
DMB37_31085
Transcription machinery [BR:
noz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
DMB37_31085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
HTH_23
MarR_2
HTH_24
HTH_Crp_2
Trp_repressor
KORA
HTH_3
HTH_Tnp_4
DUF7343
MarR
HTH_Tnp_ISL3
Sigma70_ECF
I-HmuI_NUMOD-like
HTH_31
HTH_10
HTH_28
GerE
TnsD
HTH_7
Trypco1
HTH_AraC
LacI
Motif
Other DBs
NCBI-ProteinID:
QBS43884
LinkDB
All DBs
Position
complement(6858250..6859089)
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AA seq
279 aa
AA seq
DB search
MQREFTADLVDAPRRTQSRGDSYDNIEPWFEKMATLDADDPHRNELREQVMRLCLPLAEH
IARKFAGRGESFDDLQQIASLGLLLAVDRFDVTRGSSFLSFAVPTIMGEVRRHFRDHTWA
VRVPRRLKEIQQLLGPTTETLSSRLGRVPTAREIAAELDLDVGEVTQALIAKNGYQTNSI
DAVTRDDGEATPMPLAAGLGAEEPCYQLLEQSMTVRPLIAALPERERRVLIMRFFESMTQ
AQIAEQLGVSQMQVSRILSKTLSTLRAQASDEESSLCVA
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgtgagttcacggcggacctggtcgacgccccgcgacgtacccagtcgcgcggc
gacagctacgacaatatcgagccgtggttcgagaagatggcaacgctcgacgcggacgat
ccgcatcgaaacgagttgcgcgagcaggtaatgcggctctgtctgccgctggccgagcac
atcgctcgcaagttcgccggtcgcggtgagtctttcgacgatctgcagcagatcgccagt
ctcggtttgcttctcgcggtcgaccggttcgacgtcacgcggggcagctcgttcctctcg
ttcgccgtgccgacgatcatgggcgaggtgcgcaggcacttccgggaccacacctgggcg
gtacgagttccgcgcaggctcaaggaaattcagcaactgctcgggcccaccaccgaaacg
ctgtccagccggctcggccgggtacctaccgccagggagatcgccgctgaactggacctc
gacgtcggagaggtcacccaggcgctgatcgcgaagaacggttaccagaccaactcgatc
gatgccgtgacccgcgacgacggggaggccacgccgatgccgctcgccgcgggactcggc
gcggaggagccgtgctaccagctgttggaacagtcgatgacggtccggccgttgatcgcc
gccctgcccgagcgggagcgccgggtattgatcatgcgattcttcgaatcgatgacgcag
gcgcagatcgccgagcagctcggcgtctcccagatgcaggtctcgcgcattctgtccaag
accctgagtacgctgcgcgcccaggcctcggatgaggagtcctcgctctgcgttgcctga
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