Nocardia sp. CS682: DMB37_32050
Help
Entry
DMB37_32050 CDS
T06040
Name
(GenBank) DEDD exnuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
noz
Nocardia sp. CS682
Pathway
noz03030
DNA replication
noz03430
Mismatch repair
noz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
noz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DMB37_32050
03430 Mismatch repair
DMB37_32050
03440 Homologous recombination
DMB37_32050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
noz03032
]
DMB37_32050
03400 DNA repair and recombination proteins [BR:
noz03400
]
DMB37_32050
Enzymes [BR:
noz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DMB37_32050
DNA replication proteins [BR:
noz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DMB37_32050
DNA repair and recombination proteins [BR:
noz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DMB37_32050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
GIY-YIG
UVR
DEDDh_C
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
QBS44042
LinkDB
All DBs
Position
7050352..7052505
Genome browser
AA seq
717 aa
AA seq
DB search
MSDPAPRKAAAQQLVFDDLDTPLFDTTFVVVDLETTGTSPGADAITEIGAVKVRGGEVLG
EFATLVNPGRAVPPAIVQVTGITTAMVYAAPTIASVLPGFLEFASGAVLVAHNARFDMAF
LRAAAAACDTAWPTATVLCTVKLARRVLGRDEAPSVRLSALARLLGASTQPTHRALDDAR
ATVDVLHALIARVGNQGVHSLTELVDYLPDVTPRQRAKRFLAADLPASPGVYLFRGPTDE
VLYIGTAVNLRRRVRNYFTGSETRGRMKEMVALATRVDHVVCAHALEAGVRELRLLVAHT
PPYNRRSKFPKRAWWITLTDEPFPRFSVVRTPNRDALGPFNSRADAAELALIIAEYTGLR
TCAMRLPRSGVHACPPAVVGGCPAAVAGTPINTEEYAPIPARVRALFAGYSDAPIRSMLD
RIESYSRAEHFEAAARLRDRVVAVIRALHRTQRLAAVARIAELIAAHPDGAGGWEFAVIR
YGRLAGAGTAPRGVPPMVVVEQIVASAETVIPEGGVGVGIQERIADLPTEVSSAASVGAS
APHTATSSPVESEPAVPPSAALERAVVPRAESERAALPLAESERAVVPRAESERVAMPPA
ESERVAMPPDEPERAVLPPAESERVAMPPAEPGLDASPPIVPGDWVPVNVPPLRGASPEE
AALVARWLARAGVRIVRTSEGYREPRFGAGRWLGWAEVADAAARTQPAEEEYVDRLG
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
gtgtccgaccccgcgccacgcaaagccgccgctcagcagttggtcttcgacgacctcgac
acgccgctgttcgacaccaccttcgtcgtcgtcgacctggagaccacggggaccagtccg
ggcgccgacgcgatcaccgagatcggcgcggtcaaggtgcgcggcggcgaggtgctcggc
gagttcgccaccctggtcaaccccggacgggcggtgccgccggcgatcgtgcaggtcacc
gggatcacgactgccatggtgtacgcggcacccaccatcgcgtcggtgctgcccggtttc
ctcgaattcgcctccggtgcggtgctcgtcgcgcacaacgcgcggttcgacatggcgttc
ctgcgcgccgccgcggccgcctgcgacaccgcgtggcccaccgcgacggtgttgtgcacc
gtgaagctggcccggcgggtgctcggccgggacgaggcgccgtcggtccggttgagtgcg
ctggcccggctgctcggcgcgagcacccagccgacgcaccgggcgctggacgacgcgcgg
gcgaccgtcgatgtgttgcacgcgttgatcgcccgggtcggcaatcagggcgtgcacagt
ctcaccgagttggtcgactacctgcccgatgtcaccccgcgccagcgcgcgaaacggttc
ctcgccgccgacctgcccgcgagccccggcgtgtacctgttccgcggaccgaccgacgaa
gtcctctatataggtaccgcggtgaatctgcggcgccgcgtgcgcaactacttcaccggt
tcggagacgcgcggccggatgaaagagatggtcgccctggccacccgggtcgaccatgtg
gtctgcgcgcacgcgctggaagccggtgtgcgcgagctgcgactgctcgtcgcgcacaca
ccgccctacaaccgccgctccaagtttcccaagcgagcctggtggatcacgctcaccgac
gagcccttcccgcgattctcggtcgtccgcacgccgaaccgggatgcgctggggccgttc
aactctcgcgccgacgcggccgagctggcgctgatcatcgccgagtacaccggcttgcgc
acctgcgccatgcggctgccccgaagtggcgtgcacgcctgcccgccggcggtcgtcggt
ggctgcccggctgccgtcgccggaactcctattaatacagaggaatacgcacccatcccg
gcccgcgtccgcgcgctgttcgcgggttactccgacgcccccattcgctcgatgctcgac
cgcatcgaaagctactcccgcgccgagcatttcgaggccgccgcccgtctgcgcgatcgc
gtcgttgccgtcatccgcgccctgcaccgcacccagcgcctcgccgccgtcgcccgcatc
gcggagctgatcgccgcccacccggacggcgcgggcggatgggagttcgcggtcatccgc
tacggccgcctcgcgggcgcggggaccgcaccccgcggagtgccgccgatggtcgtcgtg
gaacagatcgtcgcctccgccgaaaccgtcatcccagaaggcggcgtgggggtcggcatt
caggagcggatcgccgatctcccgacggaggtgagctccgccgccagcgtcggagcgtcc
gcaccccacaccgccacatcgtcgcctgtcgaatcggagcctgccgtcccgccgtccgcc
gcgttggagcgtgcggtcgtgccgcgtgccgaatcggagcgtgccgccctgccgcttgcc
gaatcggagcgtgcggtcgtgccgcgtgccgaatcggagcgtgtcgcaatgccgcctgcc
gaatcggagcgtgtcgcaatgccgcccgacgagccggagcgtgccgtcctgccgcctgcc
gaatcggagcgtgtcgcaatgccgcctgccgagccggggctcgacgcctcgccgcccatc
gtgccaggggattgggtgccggtgaatgtgccgccgttgcggggggcctcgccggaggag
gcggcgctggtggcgcggtggctcgcgcgggcgggcgtgcggatcgtgcggacgagtgag
gggtatcgggagccgagattcggggcggggcggtggttggggtgggcggaggtggcggat
gcggcggcgcggacccaacccgctgaggaggagtacgtggaccgcttaggctga
DBGET
integrated database retrieval system
