Nocardia sp. CS682: DMB37_33175
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Entry
DMB37_33175 CDS
T06040
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
noz
Nocardia sp. CS682
Pathway
noz03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
noz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DMB37_33175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
noz03400
]
DMB37_33175
DNA repair and recombination proteins [BR:
noz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DMB37_33175
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DMB37_33175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
DEAD
UVR
AAA_22
AAA_16
AAA_5
UB2H
DUF87
AAA_19
UPF0730
Helicase_RecD
AAA_7
AIG1
Motif
Other DBs
NCBI-ProteinID:
QBS46400
UniProt:
A0A4V1BHH4
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All DBs
Position
7290856..7293030
Genome browser
AA seq
724 aa
AA seq
DB search
MPTEGYAERAAAETPLAHSEHRPVGEIERTDGRFQVVSEHVPAGDQPAAIEELERRIRAG
ERDVVLLGATGTGKSATTAWLIERLQRPTLVMAPNKTLAAQLANELREMLPNNAVEYFVS
YYDYYQPEAYIAQTDTYIEKDSSINDDVERLRHSATSSLLSRRDVVVVASVSCIYGLGTP
QSYLDRSVQLEVGTEVDRDALLRLLVDVQYTRNDMAFTRGSFRVRGDTVEIIPSYEELAV
RIEFFGDEIEALYYLHPLTGDVVRQVDMLRIFPATHYVAGPDRMERAVRDIETELEQRLA
ELERQGKLLEAQRLRMRTQYDLEMIRQVGFCSGIENYSRHIDGRPAGSAPATLLDYFPDD
FLLVIDESHVTVPQIGGMYEGDMSRKRNLVEFGFRLPSAVDNRPLTWEEFAERIGQAVYL
SATPGPYELGQVGGEVVEQVIRPTGLVDPQVVVKPTKGQIDDLVHEIRLRTEKDERVLVT
TLTKKMAEDLTDYLLGLGVRVRYLHSEIDTLRRVELLRQLRLGEYDVLVGINLLREGLDL
PEVSLVAILDADKEGFLRSSTSLIQTIGRAARNVSGEVHMYADKITDSMRHAIDETDRRR
AKQVAYNTEQGIDPKPLRKKIADILDQVYREAEETEVEVGGSGRNSSRGRRAQGEPGRAV
SAGVYEGRDIKSMPRAELADLVKELTAQMMNAARELQFELAGRLRDEIADLKKELRGMDA
AGLS
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
attccgacggaaggctacgcggagagggcggcggccgagaccccgctcgcgcactccgag
caccggcccgtcggcgagatcgagcgcaccgacgggcgcttccaggtagtcagtgagcac
gtgcccgccggtgaccagcccgccgccatcgaggagctggaacgccggatcagggcgggg
gagcgcgacgtcgtgctgctcggcgccaccggcaccggtaagtcggcgaccaccgcgtgg
ctcatcgaacggctccagcgcccgacgctggtaatggccccgaacaagacgctcgccgcc
cagctggccaacgagctgcgggagatgctgccgaacaacgccgtcgagtacttcgtctcg
tactacgactactaccaacccgaggcgtacatcgcccagaccgacacctacatcgagaag
gacagctcgatcaacgacgacgtcgagcggctgcggcactcggcgacgtcgagcctgctg
tcgcgccgcgacgtggtggtggtcgcgtcggtgtcgtgcatctacggcctcggcaccccg
cagtcctacctcgatcgttcggtgcagctcgaggtcggcaccgaggtggaccgcgacgca
ctgctgcgcctgctcgtcgacgtgcagtacacccgcaacgacatggcgttcacccgcggc
tcgttccgggtgcgcggcgacaccgtcgagatcatcccgtcctacgaggagcttgcggtc
cgcatcgagttcttcggcgacgagatcgaggcgctgtactacctgcacccgctcaccggc
gatgtggtgcgccaggtggacatgctgcgcatcttcccggccacccactatgtggcgggc
ccggaccggatggagcgcgcggtccgcgacatcgagaccgagctggagcagcggctggcc
gagctggagcggcagggcaaactgctcgaggcgcagcggctgcgcatgcgcacccagtac
gacctggagatgatccggcaggtcggcttctgctccggcatcgagaactactcgcgccac
atcgacggccgcccggccggctcggcgcccgcgacgctgctcgactacttccccgacgac
ttcctgctcgtcatcgacgagtcgcacgtgacggtgccgcagatcggcggcatgtacgag
ggcgacatgtcgcgcaagcgcaacctggtggagttcggcttccggctgccctccgcggtg
gacaaccgaccgctcacctgggaggagttcgccgaacggatcggccaggcggtgtatctg
tcggccacccccggcccgtacgaactgggccaggtcggcggcgaggtcgtcgagcaggtc
atccgcccgaccggtctggtcgacccgcaggtcgtggtcaagccgaccaagggccagatc
gacgacctggtgcacgagatccggctgcgcaccgagaaggacgagcgggtgctggtcacc
acgctcaccaagaagatggccgaagacctcaccgactatctgctcgggctcggcgtgcgg
gtgcggtacctgcactcggagatcgacacgctgcgccgcgtcgaactgctgcgtcagctg
cggctcggcgaatacgacgtgctcgtcggcatcaacctgctgcgcgagggtctcgacctg
cccgaggtgtcgctggtcgcgatcctcgacgcggacaaggaaggcttcctgcgcagcagc
accagcctgatccagaccatcggccgcgcggcgcgcaacgtgtccggcgaggtgcacatg
tacgccgacaagatcaccgactcgatgcggcacgccatcgacgagaccgaccggcgccgg
gccaagcaggtcgcctacaacacggagcagggcatcgacccgaaaccgttgcgcaagaag
atcgccgacatcctcgaccaggtgtaccgggaggccgaggagaccgaggtggaggtcggc
ggctccggccgcaactccagccgcggccgtcgcgctcagggcgagccgggccgcgcggtc
agcgcgggcgtctacgagggccgtgacatcaagtcgatgccgcgcgccgaactcgccgac
ctggtcaaggaactcaccgcgcagatgatgaacgcggcccgcgagctgcaattcgagctc
gctggccggctgcgcgatgagatcgccgacctgaagaaggaactgcgcggcatggacgcc
gccggactgagttga
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